PMID- 30134843 OWN - NLM STAT- MEDLINE DCOM- 20181105 LR - 20181114 IS - 1471-2164 (Electronic) IS - 1471-2164 (Linking) VI - 19 IP - 1 DP - 2018 Aug 22 TI - Identification of early biological changes in palmitate-treated isolated human islets. PG - 629 LID - 10.1186/s12864-018-5008-z [doi] LID - 629 AB - BACKGROUND: Long-term exposure to elevated levels of free fatty acids (FFAs) is deleterious for beta-cell function and may contribute to development of type 2 diabetes mellitus (T2DM). Whereas mechanisms of impaired glucose-stimulated insulin secretion (GSIS) in FFA-treated beta-cells have been intensively studied, biological events preceding the secretory failure, when GSIS is accentuated, are poorly investigated. To identify these early events, we performed genome-wide analysis of gene expression in isolated human islets exposed to fatty acid palmitate for different time periods. RESULTS: Palmitate-treated human islets showed decline in beta-cell function starting from day two. Affymetrix Human Transcriptome Array 2.0 identified 903 differentially expressed genes (DEGs). Mapping of the genes onto pathways using KEGG pathway enrichment analysis predicted four islet biology-related pathways enriched prior but not after the decline of islet function and three pathways enriched both prior and after the decline of islet function. DEGs from these pathways were analyzed at the transcript level. The results propose that in palmitate-treated human islets, at early time points, protective events, including up-regulation of metallothioneins, tRNA synthetases and fatty acid-metabolising proteins, dominate over deleterious events, including inhibition of fatty acid detoxification enzymes, which contributes to the enhanced GSIS. After prolonged exposure of islets to palmitate, the protective events are outweighed by the deleterious events, which leads to impaired GSIS. CONCLUSIONS: The study identifies temporal order between different cellular events, which either promote or protect from beta-cell failure. The sequence of these events should be considered when developing strategies for prevention and treatment of the disease. FAU - Sargsyan, Ernest AU - Sargsyan E AUID- ORCID: 0000-0001-7519-6480 AD - Department of Medical Cell Biology, Uppsala University, Box 571, 75123, Uppsala, Sweden. ernest.sargsyan@mcb.uu.se. AD - Molecular Neuroscience Group, Institute of Molecular Biology, National Academy of Sciences, 0014, Yerevan, Armenia. ernest.sargsyan@mcb.uu.se. FAU - Cen, Jing AU - Cen J AD - Department of Medical Cell Biology, Uppsala University, Box 571, 75123, Uppsala, Sweden. FAU - Roomp, Kirsten AU - Roomp K AD - Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, 7 avenue des Hauts fourneaux, 4362 Esch-Belval, Luxembourg City, Luxembourg. FAU - Schneider, Reinhard AU - Schneider R AD - Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Campus Belval, 7 avenue des Hauts fourneaux, 4362 Esch-Belval, Luxembourg City, Luxembourg. FAU - Bergsten, Peter AU - Bergsten P AD - Department of Medical Cell Biology, Uppsala University, Box 571, 75123, Uppsala, Sweden. LA - eng GR - 279 153/European Commission FP7/ PT - Journal Article DEP - 20180822 PL - England TA - BMC Genomics JT - BMC genomics JID - 100965258 RN - 0 (Insulin) RN - 2V16EO95H1 (Palmitic Acid) SB - IM MH - Adult MH - Cells, Cultured MH - Female MH - Gene Expression Profiling MH - Gene Expression Regulation/drug effects MH - Humans MH - Insulin/metabolism MH - Insulin-Secreting Cells/drug effects/physiology MH - Islets of Langerhans/*drug effects/physiology MH - Male MH - Microarray Analysis MH - Middle Aged MH - Palmitic Acid/*pharmacology MH - Primary Cell Culture MH - Time Factors MH - Transcriptome/drug effects PMC - PMC6106933 COIS- ETHICS APPROVAL AND CONSENT TO PARTICIPATE: Ethical permission to use human islets has been obtained from the Regional Ethical Review Board in Uppsala, Sweden (EPN number 2010/006; 2010-02-10). CONSENT FOR PUBLICATION: Not applicable. COMPETING INTERESTS: The authors declare that they have no competing interests. PUBLISHER'S NOTE: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations. EDAT- 2018/08/24 06:00 MHDA- 2018/11/06 06:00 PMCR- 2018/08/22 CRDT- 2018/08/24 06:00 PHST- 2018/03/17 00:00 [received] PHST- 2018/08/14 00:00 [accepted] PHST- 2018/08/24 06:00 [entrez] PHST- 2018/08/24 06:00 [pubmed] PHST- 2018/11/06 06:00 [medline] PHST- 2018/08/22 00:00 [pmc-release] AID - 10.1186/s12864-018-5008-z [pii] AID - 5008 [pii] AID - 10.1186/s12864-018-5008-z [doi] PST - epublish SO - BMC Genomics. 2018 Aug 22;19(1):629. doi: 10.1186/s12864-018-5008-z.