PMID- 30237316 OWN - NLM STAT- MEDLINE DCOM- 20190916 LR - 20191210 IS - 1470-8736 (Electronic) IS - 0143-5221 (Linking) VI - 132 IP - 21 DP - 2018 Nov 15 TI - The down-regulation of hsa_circ_0012919, the sponge for miR-125a-3p, contributes to DNA methylation of CD11a and CD70 in CD4(+) T cells of systemic lupus erythematous. PG - 2285-2298 LID - 10.1042/CS20180403 [doi] AB - BACKGROUND: Systemic lupus erythematous (SLE) is an autoimmune disease characterized by the production of autoantibodies directed against various autoantigens. But the expression profiles and functions of circular RNAs (circRNAs) in SLE are still scarce. OBJECTIVES: To explore the roles of circRNA in SLE and its potential diagnostic potential in SLE. METHODS: SLE patients and healthy control subjects were recruited. CD4(+) T cells were isolated, circRNA microarray analysis were used to screen for circRNA candidate in CD4(+) T cells. Expression of DNMT1, CD11a and CD70, and methylation level of CD11a and CD70 were detected after transfecting hsa_circ_0012919-targetted siRNA. The network analysis of hsa_circ_0012919 was used by bioinformatics. Luciferase reporter assay and fluorescence in situ hybridization (FISH) assay were used for screening for which miRNAs could bind with hsa_circ_0012919. RESULTS: Twelve circRNAs were up-regulated and two circRNAs were down-regulated in SLE patients group after circRNA microarray analysis. Hsa_circ_0012919 was further confirmed to be significantly different between healthy control and SLE patients (P<0.05) and associated with SLE characters (P<0.05). Down-regulation of hsa_circ_0012919 (i) increased the expression of DNMT1 and reduced the expression of CD70, CD11a, (ii) reversed the DNA hypomethylation of CD11a and CD70 in CD4(+) T cells of SLE, but it could be reversed by down-regulation of DNMT1. Hsa_circ_0012919 regulated KLF13 and RANTES by miR-125a Conclusion: Hsa_circ_0012919 could be regarded as a biomarker for SLE and hsa_circ_0012919 was the competitive endogenous RNA (ceRNA) for miR-125a-3p. CI - (c) 2018 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society. FAU - Zhang, Chengzhong AU - Zhang C AD - Department of Dermatology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Wujin Road 85, Hongkou District, Shanghai 200080, China. FAU - Wang, Xin AU - Wang X AD - Department of Dermatology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Wujin Road 85, Hongkou District, Shanghai 200080, China. FAU - Chen, Yue AU - Chen Y AD - Department of Dermatology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Wujin Road 85, Hongkou District, Shanghai 200080, China. FAU - Wu, Zhouwei AU - Wu Z AD - Department of Dermatology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Wujin Road 85, Hongkou District, Shanghai 200080, China. FAU - Zhang, Chao AU - Zhang C AD - Department of Dermatology, Minhang Hospital, Fudan University, Xinsong Road 170, Minhang District, Shanghai 201199, China charleszhang1980@126.com shiyipifu@163.com. AD - Institute of Fudan-Minhang Academic Health System, Minhang Hospital, Fudan University, Xinsong Road 170, Minhang District, Shanghai 201199, China. FAU - Shi, Weimin AU - Shi W AUID- ORCID: 0000-0002-0401-1175 AD - Department of Dermatology, Shanghai General Hospital, Shanghai Jiaotong University School of Medicine, Wujin Road 85, Hongkou District, Shanghai 200080, China charleszhang1980@126.com shiyipifu@163.com. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20181102 PL - England TA - Clin Sci (Lond) JT - Clinical science (London, England : 1979) JID - 7905731 RN - 0 (CCL5 protein, human) RN - 0 (CD11a Antigen) RN - 0 (CD27 Ligand) RN - 0 (CD70 protein, human) RN - 0 (Cell Cycle Proteins) RN - 0 (Chemokine CCL5) RN - 0 (Genetic Markers) RN - 0 (KLF13 protein, human) RN - 0 (Kruppel-Like Transcription Factors) RN - 0 (MIRN125 microRNA, human) RN - 0 (MicroRNAs) RN - 0 (RNA, Circular) RN - 0 (Repressor Proteins) RN - 63231-63-0 (RNA) RN - EC 2.1.1.37 (DNA (Cytosine-5-)-Methyltransferase 1) RN - EC 2.1.1.37 (DNMT1 protein, human) SB - IM CIN - Clin Sci (Lond). 2019 May 7;133(9):1049-1052. PMID: 31064795 MH - Adult MH - CD11a Antigen/*genetics/immunology/metabolism MH - CD27 Ligand/*genetics/immunology/metabolism MH - CD4-Positive T-Lymphocytes/immunology/*metabolism MH - Case-Control Studies MH - Cell Cycle Proteins/genetics/metabolism MH - Cells, Cultured MH - Chemokine CCL5/genetics/metabolism MH - DNA (Cytosine-5-)-Methyltransferase 1/genetics/metabolism MH - *DNA Methylation MH - Female MH - Gene Expression Profiling/methods MH - Gene Regulatory Networks MH - Genetic Markers MH - Humans MH - Kruppel-Like Transcription Factors/genetics/metabolism MH - Lupus Erythematosus, Systemic/*genetics/immunology/metabolism MH - MicroRNAs/*genetics/metabolism MH - Oligonucleotide Array Sequence Analysis MH - RNA/*genetics/metabolism MH - RNA, Circular MH - Repressor Proteins/genetics/metabolism MH - Reverse Transcriptase Polymerase Chain Reaction OTO - NOTNLM OT - Biomarker OT - System lupus erythematous OT - hsa_circ_0012919 OT - miR-125a-3p EDAT- 2018/09/22 06:00 MHDA- 2019/09/17 06:00 CRDT- 2018/09/22 06:00 PHST- 2018/05/13 00:00 [received] PHST- 2018/09/18 00:00 [revised] PHST- 2018/09/19 00:00 [accepted] PHST- 2018/09/22 06:00 [pubmed] PHST- 2019/09/17 06:00 [medline] PHST- 2018/09/22 06:00 [entrez] AID - CS20180403 [pii] AID - 10.1042/CS20180403 [doi] PST - epublish SO - Clin Sci (Lond). 2018 Nov 2;132(21):2285-2298. doi: 10.1042/CS20180403. Print 2018 Nov 15.