PMID- 30283130 OWN - NLM STAT- MEDLINE DCOM- 20191031 LR - 20230928 IS - 2045-2322 (Electronic) IS - 2045-2322 (Linking) VI - 8 IP - 1 DP - 2018 Oct 3 TI - Caloric restriction promotes functional changes involving short-chain fatty acid biosynthesis in the rat gut microbiota. PG - 14778 LID - 10.1038/s41598-018-33100-y [doi] LID - 14778 AB - Caloric restriction (CR) is known to promote health and longevity, likely via modification of the gut microbiota (GM). However, functional and metabolic changes induced in the GM during CR are still unidentified. Here, we investigated the short- and long-term effects of CR on the rat GM using a metaproteogenomic approach. We show that a switch from ad libitum (AL) low fat diet to CR in young rats is able to induce rapid and deep changes in their GM metaproteomic profile, related to a reduction of the Firmicutes/Bacteroidetes ratio and an expansion of lactobacilli. Specifically, we observed a significant change in the expression of the microbial enzymes responsible for short-chain fatty acid biosynthesis, with CR boosting propionogenesis and limiting butyrogenesis and acetogenesis. Furthermore, these CR-induced effects were maintained up to adulthood and started to be reversed after a short-term diet change. We also found that CR alters the abundance of an array of host proteins released in stool, mainly related to epithelial barrier integrity and inflammation. Hence, our results provide thorough information about CR-induced modifications to GM and host functional activity, and might constitute the basis for novel GM-based approaches aimed at monitoring the effectiveness of dietary interventions. FAU - Tanca, Alessandro AU - Tanca A AD - Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy. FAU - Abbondio, Marcello AU - Abbondio M AD - Department of Biomedical Sciences, University of Sassari, Sassari, Italy. FAU - Palomba, Antonio AU - Palomba A AD - Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy. FAU - Fraumene, Cristina AU - Fraumene C AD - Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy. FAU - Marongiu, Fabio AU - Marongiu F AD - Department of Biomedical Sciences, University of Cagliari, Cagliari, Italy. FAU - Serra, Monica AU - Serra M AD - Department of Biomedical Sciences, University of Cagliari, Cagliari, Italy. FAU - Pagnozzi, Daniela AU - Pagnozzi D AD - Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy. FAU - Laconi, Ezio AU - Laconi E AD - Department of Biomedical Sciences, University of Cagliari, Cagliari, Italy. FAU - Uzzau, Sergio AU - Uzzau S AUID- ORCID: 0000-0001-6246-2794 AD - Porto Conte Ricerche, Science and Technology Park of Sardinia, Tramariglio, Alghero, Italy. uzzau@portocontericerche.it. AD - Department of Biomedical Sciences, University of Sassari, Sassari, Italy. uzzau@portocontericerche.it. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20181003 PL - England TA - Sci Rep JT - Scientific reports JID - 101563288 RN - 0 (Fatty Acids, Volatile) SB - IM MH - Adipogenesis/*genetics MH - Animals MH - Bacteroidetes/isolation & purification/metabolism MH - *Caloric Restriction MH - Fatty Acids, Volatile/*metabolism MH - Firmicutes/isolation & purification/metabolism MH - Gastrointestinal Microbiome/*genetics MH - Lactobacillus/isolation & purification/metabolism MH - Lipogenesis/genetics MH - Longevity/genetics/physiology MH - Rats PMC - PMC6170429 COIS- The authors declare no competing interests. EDAT- 2018/10/05 06:00 MHDA- 2019/11/02 06:00 PMCR- 2018/10/03 CRDT- 2018/10/05 06:00 PHST- 2018/01/22 00:00 [received] PHST- 2018/08/22 00:00 [accepted] PHST- 2018/10/05 06:00 [entrez] PHST- 2018/10/05 06:00 [pubmed] PHST- 2019/11/02 06:00 [medline] PHST- 2018/10/03 00:00 [pmc-release] AID - 10.1038/s41598-018-33100-y [pii] AID - 33100 [pii] AID - 10.1038/s41598-018-33100-y [doi] PST - epublish SO - Sci Rep. 2018 Oct 3;8(1):14778. doi: 10.1038/s41598-018-33100-y.