PMID- 30396921 OWN - NLM STAT- MEDLINE DCOM- 20181217 LR - 20181217 IS - 1791-7530 (Electronic) IS - 0250-7005 (Linking) VI - 38 IP - 11 DP - 2018 Nov TI - Transcriptomic Analysis of Histone Methyltransferase Setd7 Knockdown and Phenethyl Isothiocyanate in Human Prostate Cancer Cells. PG - 6069-6083 LID - 10.21873/anticanres.12957 [doi] AB - BACKGROUND/AIM: Transcriptomic analysis was performed to evaluate the differential gene expression profiles of Setd7 knockdown (KD) and the effects of phenethyl isothiocyanate (PEITC) in human prostate cancer (PCa) LNCaP cells. MATERIALS AND METHODS: RNA isolated from wild-type and Setd7-KD LNCaP cells in the presence or absence of PEITC was subjected to microarray analysis followed by Ingenuity(R) Pathway Analysis (IPA). RESULTS: Setd7 KD impacted a larger set of genes and caused a higher fold change compared to PEITC treatment. Several signaling pathways were altered particularly inflammation-related TNFR signaling and PTEN/PI3K/AKT signaling by Setd7 KD and PEITC. Interestingly, PEITC and Setd7 KD at a small subset of genes that could be potential molecular targets. CONCLUSION: This study offers new insights into the mechanisms of action of the epigenetic modifier Setd7 and the effects of PEITC treatment in PCa cells and enhances our understanding of the potential cancer preventive/treatment effects of isothiocyanate compounds such as PEITC in PCa. CI - Copyright(c) 2018, International Institute of Anticancer Research (Dr. George J. Delinasios), All rights reserved. FAU - Wang, Chao AU - Wang C AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. FAU - Sargsyan, Davit AU - Sargsyan D AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Graduate Program of Pharmaceutical Sciences, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. FAU - Zhang, Chengyue AU - Zhang C AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Graduate Program of Pharmaceutical Sciences, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. FAU - Wu, Renyi AU - Wu R AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. FAU - Yang, Yuqing AU - Yang Y AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. AD - Graduate Program of Pharmaceutical Sciences, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. FAU - Kong, Ah-Ng AU - Kong AN AD - Department of Pharmaceutics, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. KongT@pharmacy.rutgers.edu. AD - Center for Phytochemical Epigenome Studies, Ernest Mario School of Pharmacy, Rutgers, the State University of New Jersey, Piscataway, NJ, U.S.A. LA - eng PT - Journal Article PL - Greece TA - Anticancer Res JT - Anticancer research JID - 8102988 RN - 0 (Isothiocyanates) RN - 6U7TFK75KV (phenethyl isothiocyanate) RN - EC 2.1.1.43 (Histone-Lysine N-Methyltransferase) RN - EC 2.1.1.43 (SETD7 protein, human) SB - IM MH - Cell Line, Tumor MH - Epigenesis, Genetic MH - Gene Expression Regulation, Neoplastic/*drug effects MH - Gene Knockout Techniques MH - Histone-Lysine N-Methyltransferase/biosynthesis/deficiency/*genetics MH - Humans MH - Isothiocyanates/*pharmacology MH - Male MH - Prostatic Neoplasms/enzymology/genetics MH - Transcriptome OTO - NOTNLM OT - Microarray OT - PEITC OT - Setd7 OT - histone methyltransferase OT - isothiocyanates OT - prostate cancer EDAT- 2018/11/07 06:00 MHDA- 2018/12/18 06:00 CRDT- 2018/11/07 06:00 PHST- 2018/07/25 00:00 [received] PHST- 2018/09/19 00:00 [revised] PHST- 2018/09/28 00:00 [accepted] PHST- 2018/11/07 06:00 [entrez] PHST- 2018/11/07 06:00 [pubmed] PHST- 2018/12/18 06:00 [medline] AID - 38/11/6069 [pii] AID - 10.21873/anticanres.12957 [doi] PST - ppublish SO - Anticancer Res. 2018 Nov;38(11):6069-6083. doi: 10.21873/anticanres.12957.