PMID- 30538135 OWN - NLM STAT- MEDLINE DCOM- 20191112 LR - 20210202 IS - 1528-0020 (Electronic) IS - 0006-4971 (Print) IS - 0006-4971 (Linking) VI - 133 IP - 9 DP - 2019 Feb 28 TI - CCND2 and CCND3 hijack immunoglobulin light-chain enhancers in cyclin D1(-) mantle cell lymphoma. PG - 940-951 LID - 10.1182/blood-2018-07-862151 [doi] AB - Mantle cell lymphoma (MCL) is characterized by the t(11;14)(q13;q32) translocation resulting in overexpression of cyclin D1. However, a small subset of cyclin D1(-) MCL has been recognized, and approximately one-half of them harbor CCND2 translocations while the primary event in cyclin D1(-)/D2(-) MCL remains elusive. To identify other potential mechanisms driving MCL pathogenesis, we investigated 56 cyclin D1(-)/SOX11(+) MCL by fluorescence in situ hybridization (FISH), whole-genome/exome sequencing, and gene-expression and copy-number arrays. FISH with break-apart probes identified CCND2 rearrangements in 39 cases (70%) but not CCND3 rearrangements. We analyzed 3 of these negative cases by whole-genome/exome sequencing and identified IGK (n = 2) and IGL (n = 1) enhancer hijackings near CCND3 that were associated with cyclin D3 overexpression. By specific FISH probes, including the IGK enhancer region, we detected 10 additional cryptic IGK juxtapositions to CCND3 (6 cases) and CCND2 (4 cases) in MCL that overexpressed, respectively, these cyclins. A minor subset of 4 cyclin D1(-) MCL cases lacked cyclin D rearrangements and showed upregulation of CCNE1 and CCNE2. These cases had blastoid morphology, high genomic complexity, and CDKN2A and RB1 deletions. Both genomic and gene-expression profiles of cyclin D1(-) MCL cases were indistinguishable from cyclin D1(+) MCL. In conclusion, virtually all cyclin D1(-) MCLs carry CCND2/CCND3 rearrangements with immunoglobulin genes, including a novel IGK/L enhancer hijacking mechanism. A subset of cyclin D1(-)/D2(-)/D3(-) MCL with aggressive features has cyclin E dysregulation. Specific FISH probes may allow the molecular identification and diagnosis of cyclin D1(-) MCL. CI - (c) 2019 by The American Society of Hematology. FAU - Martin-Garcia, David AU - Martin-Garcia D AUID- ORCID: 0000-0002-0289-5915 AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. FAU - Navarro, Alba AU - Navarro A AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. FAU - Valdes-Mas, Rafael AU - Valdes-Mas R AD - Departamento de Bioquimica y Biologia Molecular, Instituto Universitario de Oncologia, Universidad de Oviedo, Oviedo, Spain. FAU - Clot, Guillem AU - Clot G AUID- ORCID: 0000-0003-2588-7413 AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. FAU - Gutierrez-Abril, Jesus AU - Gutierrez-Abril J AD - Departamento de Bioquimica y Biologia Molecular, Instituto Universitario de Oncologia, Universidad de Oviedo, Oviedo, Spain. FAU - Prieto, Miriam AU - Prieto M AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. FAU - Ribera-Cortada, Inmaculada AU - Ribera-Cortada I AD - Hospital Nostra Senyora de Meritxell, Escaldes-Engordany, Andorra. FAU - Woroniecka, Renata AU - Woroniecka R AD - Cytogenetic Laboratory and. FAU - Rymkiewicz, Grzegorz AU - Rymkiewicz G AD - Department of Pathology and Laboratory Diagnostics, Maria Sklodowska-Curie Institute-Oncology Center, Warsaw, Poland. FAU - Bens, Susanne AU - Bens S AD - Institute of Human Genetics, Ulm University Medical Center, Ulm University, Ulm, Germany. AD - Institute of Human Genetics, Christian Albrechts University Kiel/University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany. FAU - de Leval, Laurence AU - de Leval L AUID- ORCID: 0000-0003-3994-516X AD - Institut de Pathologie, Centre Hospitalier Universitaire Vaudois, Lausanne, Switzerland. FAU - Rosenwald, Andreas AU - Rosenwald A AD - Institute of Pathology and. AD - Comprehensive Cancer Center Mainfranken, University of Wurzburg, Wurzburg, Germany. FAU - Ferry, Judith A AU - Ferry JA AD - Department of Pathology, Massachusetts General Hospital/Harvard Medical School, Boston, MA. FAU - Hsi, Eric D AU - Hsi ED AD - Cleveland Clinic Foundation, Cleveland, OH. FAU - Fu, Kai AU - Fu K AD - Department of Pathology and Microbiology and. AD - Division of Oncology and Hematology, Department of Internal Medicine, College of Medicine, University of Nebraska Medical Center, Omaha, NE. FAU - Delabie, Jan AU - Delabie J AUID- ORCID: 0000-0001-5023-0689 AD - Department of Laboratory Medicine and Pathobiology, Faculty of Medicine, University of Toronto, Toronto, ON, Canada. AD - Oslo University Hospital, Oslo, Norway. FAU - Weisenburger, Dennis AU - Weisenburger D AD - Department of Pathology, City of Hope National Medical Center, Duarte, CA. FAU - de Jong, Daphne AU - de Jong D AD - VU University Medical Center, Amsterdam, The Netherlands. FAU - Climent, Fina AU - Climent F AD - Hospital Universitari de Bellvitge-Institut d'Investigacio Biomedica de Bellvitge (IDIBELL), L'Hospitalet de Llobregat, Spain. FAU - O'Connor, Sheila J AU - O'Connor SJ AD - Haematological Malignancy Diagnostic Service (HMDS) Laboratory, St. James's Institute of Oncology, Leeds Teaching Hospitals NHS Trust, Leeds, United Kingdom. FAU - Swerdlow, Steven H AU - Swerdlow SH AD - Department of Pathology, School of Medicine, University of Pittsburgh, Pittsburgh, PA. FAU - Torrents, David AU - Torrents D AUID- ORCID: 0000-0002-6086-9037 AD - Joint Barcelona Supercomputing Center (BSC)-Centre for Genomic Regulation (CRG)-Institute for Research in Biomedicine (IRB) Research Programme in Computational Biology, Barcelona, Spain. AD - Institucio Catalana de Recerca i Estudis Avancats (ICREA), Barcelona, Spain. FAU - Beltran, Sergi AU - Beltran S AUID- ORCID: 0000-0002-2810-3445 AD - Centre Nacional d'Analisi Genomica (CNAG)-CRG, Barcelona, Spain. FAU - Espinet, Blanca AU - Espinet B AD - Laboratori de Citogenetica Molecular, Servei de Patologia, Hospital del Mar, Barcelona, Spain. AD - Grup de Recerca Translacional en Neoplasies Hematologiques, Cancer Research Programme, Institut Hospital del Mar d'Investigacions Mediques (IMIM)-Hospital del Mar, Barcelona, Spain. FAU - Gonzalez-Farre, Blanca AU - Gonzalez-Farre B AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. AD - Hematopathology Section, Hospital Clinic de Barcelona, Barcelona, Spain. FAU - Veloza, Luis AU - Veloza L AD - Hematopathology Section, Hospital Clinic de Barcelona, Barcelona, Spain. FAU - Costa, Dolors AU - Costa D AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. AD - Hematopathology Section, Hospital Clinic de Barcelona, Barcelona, Spain. FAU - Matutes, Estella AU - Matutes E AD - Hematopathology Section, Hospital Clinic de Barcelona, Barcelona, Spain. FAU - Siebert, Reiner AU - Siebert R AD - Institute of Human Genetics, Ulm University Medical Center, Ulm University, Ulm, Germany. AD - Institute of Human Genetics, Christian Albrechts University Kiel/University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany. FAU - Ott, German AU - Ott G AD - Department of Clinical Pathology and. AD - Dr Margarete "Fischer Bosch Institute" of Clinical Pharmacology, Robert Bosch Hospital, Stuttgart, Germany. FAU - Quintanilla-Martinez, Leticia AU - Quintanilla-Martinez L AUID- ORCID: 0000-0001-7156-5365 AD - Institute of Pathology, Eberhard Karls University of Tubingen, Tubingen, Germany. FAU - Jaffe, Elaine S AU - Jaffe ES AUID- ORCID: 0000-0003-4632-0301 AD - Laboratory of Pathology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD; and. FAU - Lopez-Otin, Carlos AU - Lopez-Otin C AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. AD - Departamento de Bioquimica y Biologia Molecular, Instituto Universitario de Oncologia, Universidad de Oviedo, Oviedo, Spain. FAU - Salaverria, Itziar AU - Salaverria I AUID- ORCID: 0000-0002-2427-9822 AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. FAU - Puente, Xose S AU - Puente XS AUID- ORCID: 0000-0001-9525-1483 AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. AD - Departamento de Bioquimica y Biologia Molecular, Instituto Universitario de Oncologia, Universidad de Oviedo, Oviedo, Spain. FAU - Campo, Elias AU - Campo E AUID- ORCID: 0000-0001-9850-9793 AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. AD - Hematopathology Section, Hospital Clinic de Barcelona, Barcelona, Spain. AD - Department of Anatomic Pathology, University of Barcelona, Barcelona, Spain. FAU - Bea, Silvia AU - Bea S AUID- ORCID: 0000-0001-7192-2385 AD - Institut d'Investigacions Biomediques August Pi i Sunyer (IDIBAPS), Barcelona, Spain. AD - Centro de Investigacion Biomedica en Red de Cancer (CIBERONC), Madrid, Spain. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20181211 PL - United States TA - Blood JT - Blood JID - 7603509 RN - 0 (CCND1 protein, human) RN - 0 (CCND2 protein, human) RN - 0 (CCND3 protein, human) RN - 0 (Cyclin D2) RN - 0 (Cyclin D3) RN - 0 (Immunoglobulin Light Chains) RN - 0 (SOX11 protein, human) RN - 0 (SOXC Transcription Factors) RN - 136601-57-5 (Cyclin D1) SB - IM MH - Aged MH - Cyclin D1/genetics/metabolism MH - Cyclin D2/*genetics MH - Cyclin D3/*genetics MH - *Enhancer Elements, Genetic MH - Female MH - *Gene Rearrangement MH - Humans MH - Immunoglobulin Light Chains/*genetics MH - Lymphoma, Mantle-Cell/*genetics/pathology MH - Male MH - Middle Aged MH - Prognosis MH - SOXC Transcription Factors/genetics MH - Translocation, Genetic PMC - PMC6396173 COIS- Conflict-of-interest disclosure: E.C. has received research funding from Gilead Sciences; has been a consultant for Takeda, Celgene, and Gilead; and is an author in a Lymphoma and Leukemia Molecular Profiling Project (LLMPP) patent "Method for selecting and treating lymphoma types" PCT/US14/64161. The remaining authors declare no competing financial interests. EDAT- 2018/12/13 06:00 MHDA- 2019/11/13 06:00 PMCR- 2020/02/28 CRDT- 2018/12/13 06:00 PHST- 2018/07/09 00:00 [received] PHST- 2018/12/01 00:00 [accepted] PHST- 2018/12/13 06:00 [pubmed] PHST- 2019/11/13 06:00 [medline] PHST- 2018/12/13 06:00 [entrez] PHST- 2020/02/28 00:00 [pmc-release] AID - S0006-4971(20)42747-8 [pii] AID - 2019/862151 [pii] AID - 10.1182/blood-2018-07-862151 [doi] PST - ppublish SO - Blood. 2019 Feb 28;133(9):940-951. doi: 10.1182/blood-2018-07-862151. Epub 2018 Dec 11.