PMID- 30965283 OWN - NLM STAT- MEDLINE DCOM- 20200722 LR - 20210716 IS - 1479-6821 (Electronic) IS - 1351-0088 (Print) IS - 1351-0088 (Linking) VI - 26 IP - 6 DP - 2019 Jun TI - Papillary thyroid carcinoma behavior: clues in the tumor microenvironment. PG - 601-614 LID - 10.1530/ERC-19-0074 [doi] AB - The prevalence of thyroid carcinoma is increasing and represents the most common endocrine malignancy, with papillary thyroid carcinoma (PTC) being the most frequent subtype. The genetic alterations identified in PTCs fail to distinguish tumors with different clinical behaviors, such as extra-thyroidal extension and lymph node metastasis. We hypothesize that the immune microenvironment may play a critical role in tumor invasion and metastasis. Computational immunogenomic analysis was performed on 568 PTC samples in The Cancer Genome Atlas using CIBERSORT, TIMER and TIDE deconvolution analytic tools for characterizing immune cell composition. Immune cell infiltrates were correlated with histologic type, mutational type, tumor pathologic T stage and lymph node N stage. Dendritic cells (DCs) are highly associated with more locally advanced tumor T stage (T3/T4, odds ratio (OR) = 2.6, CI = 1.4-4.5, P = 5.4 x 10-4). Increased dendritic cells (OR = 3.4, CI = 1.9-6.3, P = 5.5 x 10-5) and neutrophils (OR = 10.5, CI = 2.7-44, P = 8.7 x 10-4) significantly correlate with lymph node metastasis. In addition, dendritic cells positively correlate with tall cell morphology (OR = 4.5, CI = 1.6-13, P = 4.9 x 10-3) and neutrophils negatively correlate with follicular morphology (OR = 1.3 x 10-3, CI = 5.3 x 10-5-0.031, P = 4.1 x 10-5). TIDE analysis indicates an immune-exclusive phenotype that may be mediated by increased galectin-3 found in PTCs. Thus, characterization of the PTC immune microenvironment using three computational platforms shows that specific immune cells correlate with mutational type, histologic type, local tumor extent and lymph node metastasis. Immunologic evaluation of PTCs may provide a better indication of biologic behavior, resulting in the improved diagnosis and treatment of thyroid cancer. FAU - Bergdorf, Kensey AU - Bergdorf K AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. FAU - Ferguson, Donna C AU - Ferguson DC AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. FAU - Mehrad, Mitra AU - Mehrad M AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. FAU - Ely, Kim AU - Ely K AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. FAU - Stricker, Thomas AU - Stricker T AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. FAU - Weiss, Vivian L AU - Weiss VL AD - Department of Pathology, Microbiology and Immunology, Vanderbilt University Medical Center, Nashville, Tennessee, USA. LA - eng GR - S10 OD023475/OD/NIH HHS/United States GR - P30 CA068485/CA/NCI NIH HHS/United States GR - U24 DK059637/DK/NIDDK NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PL - England TA - Endocr Relat Cancer JT - Endocrine-related cancer JID - 9436481 RN - 0 (Biomarkers, Tumor) SB - IM MH - Adolescent MH - Adult MH - Aged MH - Aged, 80 and over MH - Biomarkers, Tumor/*genetics MH - Female MH - Follow-Up Studies MH - Humans MH - Lymphocytes, Tumor-Infiltrating/*immunology MH - Male MH - Middle Aged MH - *Mutation MH - Prognosis MH - Thyroid Cancer, Papillary/genetics/immunology/*pathology MH - Thyroid Neoplasms/genetics/immunology/*pathology MH - Tumor Microenvironment/*genetics/*immunology MH - Young Adult PMC - PMC8279427 MID - NIHMS1712865 OTO - NOTNLM OT - RNA sequencing OT - immunogenomics OT - papillary thyroid carcinoma OT - thyroid cancer OT - tumor immunology COIS- Disclosure: No potential conflicts of interest were disclosed by the authors. Declaration of Interest: None of the authors have any conflicts of interest. EDAT- 2019/04/10 06:00 MHDA- 2020/07/23 06:00 PMCR- 2021/07/14 CRDT- 2019/04/10 06:00 PHST- 2019/04/01 00:00 [received] PHST- 2019/04/09 00:00 [accepted] PHST- 2019/04/10 06:00 [pubmed] PHST- 2020/07/23 06:00 [medline] PHST- 2019/04/10 06:00 [entrez] PHST- 2021/07/14 00:00 [pmc-release] AID - ERC-19-0074.R1 [pii] AID - 10.1530/ERC-19-0074 [doi] PST - ppublish SO - Endocr Relat Cancer. 2019 Jun;26(6):601-614. doi: 10.1530/ERC-19-0074.