PMID- 31988622
OWN - NLM
STAT- PubMed-not-MEDLINE
LR  - 20200929
IS  - 1344-7610 (Print)
IS  - 1347-3735 (Electronic)
IS  - 1344-7610 (Linking)
VI  - 69
IP  - 4
DP  - 2019 Dec
TI  - Construction of a genetic linkage map of Lentinula edodes based on SSR, SRAP and 
      TRAP markers.
PG  - 585-591
LID - 10.1270/jsbbs.18123 [doi]
AB  - Genetic mapping is a basic tool for eukaryotic genomic research. It allows the 
      localization of genes or quantitative trait loci (QTLs) and map-based cloning. In 
      this study, we constructed a linkage map based on DNA samples from a commercial 
      strain L808, including two parental monokaryons and 93 single spore isolates 
      considered with segregating to 1:1:1:1 at four mating types (A(1)B(1), A(1)B(2), 
      A(2)B(1) and A(2)B(2)). Using Simple Sequence Repeats (SSR), Sequence Related 
      Amplified Polymorphism (SRAP), Target Region Amplified Polymorphism (TRAP) 
      molecular markers, 182 molecular markers and two mating factors were located on 
      11 linkage groups (LGs). The total length of the map was 948.083 centimorgan 
      (cM), with an average marker interval distance of 4.817 cM. Only two gaps 
      spanning more than 20 cM was observed. The probability of 20 cM, 10 cM, 5 cM 
      genetic distance cover one marker was 99.68%, 94.36%, 76.43% in our genetic 
      linkage map, respectively. This is the first linkage map of Lentinula edodes 
      using SSR markers, which provides essential information for quantitative trait 
      analyses and improvement of genome assembly.
CI  - Copyright (c) 2019 by JAPANESE SOCIETY OF BREEDING.
FAU - Dong, Hui
AU  - Dong H
AD  - Institute of Agro-Food Quality Standard and Testing Technology, Shanghai Academy 
      of Agricultural Sciences, Laboratory of Agro-Food Quality and Safety Risk 
      Assessment at Shanghai, Shanghai, 201403, China.
FAU - Shang, Xiaodong
AU  - Shang X
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
FAU - Zhao, Xiaoyan
AU  - Zhao X
AD  - Institute of Agro-Food Quality Standard and Testing Technology, Shanghai Academy 
      of Agricultural Sciences, Laboratory of Agro-Food Quality and Safety Risk 
      Assessment at Shanghai, Shanghai, 201403, China.
FAU - Yu, Hailong
AU  - Yu H
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
FAU - Jiang, Ning
AU  - Jiang N
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
FAU - Zhang, Meiyan
AU  - Zhang M
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
FAU - Tan, Qi
AU  - Tan Q
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
FAU - Zhou, Changyan
AU  - Zhou C
AD  - Institute of Agro-Food Quality Standard and Testing Technology, Shanghai Academy 
      of Agricultural Sciences, Laboratory of Agro-Food Quality and Safety Risk 
      Assessment at Shanghai, Shanghai, 201403, China.
FAU - Zhang, Lujun
AU  - Zhang L
AD  - Institute of Edible Fungi, Shanghai Academy of Agricultural Sciences, National 
      Research Center of Edible Fungi Biotechnology and Engineering, Shanghai, 201403, 
      China.
LA  - eng
PT  - Journal Article
DEP - 20190919
PL  - Japan
TA  - Breed Sci
JT  - Breeding science
JID - 9888571
PMC - PMC6977451
OTO - NOTNLM
OT  - Lentinula edodes
OT  - SSR
OT  - genetic linkage map
EDAT- 2020/01/29 06:00
MHDA- 2020/01/29 06:01
PMCR- 2019/12/01
CRDT- 2020/01/29 06:00
PHST- 2018/08/15 00:00 [received]
PHST- 2019/07/01 00:00 [accepted]
PHST- 2020/01/29 06:00 [entrez]
PHST- 2020/01/29 06:00 [pubmed]
PHST- 2020/01/29 06:01 [medline]
PHST- 2019/12/01 00:00 [pmc-release]
AID - 69_18123 [pii]
AID - 10.1270/jsbbs.18123 [doi]
PST - ppublish
SO  - Breed Sci. 2019 Dec;69(4):585-591. doi: 10.1270/jsbbs.18123. Epub 2019 Sep 19.