PMID- 32034748 OWN - NLM STAT- MEDLINE DCOM- 20200305 LR - 20200305 IS - 1003-9406 (Print) IS - 1003-9406 (Linking) VI - 37 IP - 2 DP - 2020 Feb 10 TI - [Phenotypic and genetic analysis of a child with multiple malformations due to 10p13p15.3 duplication]. PG - 170-174 LID - 10.3760/cma.j.issn.1003-9406.2020.02.018 [doi] AB - OBJECTIVE: To explore the basis for a child with multiple malformations and correlate her genotype with phenotype. METHODS: The child was subjected to G-banding chromosomal analysis first, and low-coverage massively parallel copy number variation sequencing (CNV-seq) was used to define the aberrant region. The results were verified by fluorescence in situ hybridization (FISH). RESULTS: The child was found to have a karyotype of 46,XX,3pter+?. CNV-seq has identified a 13.5 Mb duplication at 10p13p15.3(60 466-13 556 655) and a 636 kb microdeletion at 3p26.3 (60 064-695 821). Her karyotype was the refore specified as 46, XX, ish der(3) t(3;10) (10p+,3pdim) by FISH. Both of her parents were normal, which suggested an de novo origin of the above variant. CONCLUSION: The de novo 10p13p15.3 duplication probably underlies the mental retardation, development delay, dysmorphism, and gastroesophageal reflux in the child. The CHL1 gene from the 3p26.3 region may play an important role in the formation and function of the brain, which may underlie the intellectual deficit in this child. FAU - Xu, Xiaocha AU - Xu X AD - Department of Genetics and Metabolism, Children's Hospital of Zhejiang University School of Medicine, Hangzhou, Zhejiang 310052, China. chsczx@zju.edu.cn. FAU - Zhang, Ting AU - Zhang T FAU - Shen, Yaping AU - Shen Y FAU - Zheng, Jing AU - Zheng J FAU - Yang, Rulai AU - Yang R LA - chi PT - Case Reports PT - Journal Article PL - China TA - Zhonghua Yi Xue Yi Chuan Xue Za Zhi JT - Zhonghua yi xue yi chuan xue za zhi = Zhonghua yixue yichuanxue zazhi = Chinese journal of medical genetics JID - 9425197 SB - IM MH - *Abnormalities, Multiple/genetics MH - Child MH - Chromosome Banding MH - Chromosome Deletion MH - Chromosomes, Human MH - DNA Copy Number Variations MH - Female MH - Humans MH - In Situ Hybridization, Fluorescence MH - *Intellectual Disability MH - Phenotype EDAT- 2020/02/09 06:00 MHDA- 2020/03/07 06:00 CRDT- 2020/02/09 06:00 PHST- 2020/02/09 06:00 [entrez] PHST- 2020/02/09 06:00 [pubmed] PHST- 2020/03/07 06:00 [medline] AID - 940637038 [pii] AID - 10.3760/cma.j.issn.1003-9406.2020.02.018 [doi] PST - ppublish SO - Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2020 Feb 10;37(2):170-174. doi: 10.3760/cma.j.issn.1003-9406.2020.02.018.