PMID- 32273741 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20220413 IS - 1178-7007 (Print) IS - 1178-7007 (Electronic) IS - 1178-7007 (Linking) VI - 13 DP - 2020 TI - SLC30A8, CDKAL1, TCF7L2, KCNQ1 and IGF2BP2 are Associated with Type 2 Diabetes Mellitus in Iranian Patients. PG - 897-906 LID - 10.2147/DMSO.S225968 [doi] AB - BACKGROUND: Type 2 diabetes mellitus (T2DM) is a serious public health issue with significantly increasing rates across the world. The genome-wide association studies (GWAS) have previously manifested involved genes that remarkably enhance the risk of T2DM. In this study, the association of common variants with T2DM risk has been identified among Iranian population from Tehran province of Iran. METHODS: Here, the association of refSNPs with T2DM risk was examined on peripheral blood samples of 268 individuals including control group and patients with T2DM using the tetra amplification refractory mutation system (ARMS) methods and direct genomic DNA sequencing. RESULTS: Our study demonstrated that SLC30A8 rs13266634 (T/C), CDKAL1 rs10946398 (A/C), TCF7L2 rs7903146 (C/T), KCNQ1 rs2237892 (T/C), and IGF2BP2 rs1470579 (A/C) polymorphisms are significantly associated with type 2 diabetes, but no significant association was identified for FTO rs8050136 and MTNR1B rs10830963 polymorphisms. CONCLUSION: The prediction of refSNPs is remarkably needed for pharmacogenetics and pharmacogenomic approaches, in which the information would be useful for clinicians to optimize therapeutic strategies and adverse drug reactions in patients with T2DM. CI - (c) 2020 Vatankhah Yazdi et al. FAU - Vatankhah Yazdi, Kazem AU - Vatankhah Yazdi K AD - Department of Genetic, Shahid Sadoughi University of Medical Sciences and Health Services, Yazd, Iran. FAU - Kalantar, Seyed Mehdi AU - Kalantar SM AD - Department of Genetic, Shahid Sadoughi University of Medical Sciences and Health Services, Yazd, Iran. FAU - Houshmand, Massoud AU - Houshmand M AD - Department of Medical Genetics, National Institute for Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran. AD - Research Center, Knowledge University, Erbil, Kurdistan Region, Iraq. FAU - Rahmanian, Masoud AU - Rahmanian M AD - Yazd Diabetes Research Center, Shahid Sadoughi University of Medical Sciences and Health Services, Yazd, Iran. FAU - Manaviat, Masoud Reza AU - Manaviat MR AD - Department of Ophthalmology, Shahid Sadoughi University of Medical Sciences and Health Services, Yazd, Iran. FAU - Jahani, Mohammad Reza AU - Jahani MR AUID- ORCID: 0000-0003-2406-6162 AD - Taban Health Care and Diabetes Clinic Lab, Tehran, Iran. FAU - Kamalidehghan, Behnam AU - Kamalidehghan B AD - Department of Medical Genetics, National Institute for Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran. AD - Medical Genetics Department, Jiroft University of Medical Sciences and Health Services, Jiroft, Iran. FAU - Almasi-Hashiani, Amir AU - Almasi-Hashiani A AUID- ORCID: 0000-0003-4434-561X AD - Department of Epidemiology, School of Health, Arak University of Medical Sciences, Arak, Iran. LA - eng PT - Journal Article DEP - 20200324 PL - New Zealand TA - Diabetes Metab Syndr Obes JT - Diabetes, metabolic syndrome and obesity : targets and therapy JID - 101515585 PMC - PMC7102914 OTO - NOTNLM OT - ARMS OT - GWAS OT - Iranian populations OT - T2DM OT - the genome-wide association studies OT - the tetra amplification refractory mutation system OT - type 2 diabetes mellitus COIS- The authors report no conflicts of interest in this work. EDAT- 2020/04/11 06:00 MHDA- 2020/04/11 06:01 PMCR- 2020/03/24 CRDT- 2020/04/11 06:00 PHST- 2019/08/04 00:00 [received] PHST- 2020/02/18 00:00 [accepted] PHST- 2020/04/11 06:00 [entrez] PHST- 2020/04/11 06:00 [pubmed] PHST- 2020/04/11 06:01 [medline] PHST- 2020/03/24 00:00 [pmc-release] AID - 225968 [pii] AID - 10.2147/DMSO.S225968 [doi] PST - epublish SO - Diabetes Metab Syndr Obes. 2020 Mar 24;13:897-906. doi: 10.2147/DMSO.S225968. eCollection 2020.