PMID- 33334054 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20210211 IS - 2072-6694 (Print) IS - 2072-6694 (Electronic) IS - 2072-6694 (Linking) VI - 12 IP - 12 DP - 2020 Dec 15 TI - Stroma Transcriptomic and Proteomic Profile of Prostate Cancer Metastasis Xenograft Models Reveals Prognostic Value of Stroma Signatures. LID - 10.3390/cancers12123786 [doi] LID - 3786 AB - Resistance acquisition to androgen deprivation treatment and metastasis progression are a major clinical issue associated with prostate cancer (PCa). The role of stroma during disease progression is insufficiently defined. Using transcriptomic and proteomic analyses on differentially aggressive patient-derived xenografts (PDXs), we investigated whether PCa tumors predispose their microenvironment (stroma) to a metastatic gene expression pattern. RNA sequencing was performed on the PCa PDXs BM18 (castration-sensitive) and LAPC9 (castration-resistant), representing different disease stages. Using organism-specific reference databases, the human-specific transcriptome (tumor) was identified and separated from the mouse-specific transcriptome (stroma). To identify proteomic changes in the tumor (human) versus the stroma (mouse), we performed human/mouse cell separation and subjected protein lysates to quantitative Tandem Mass Tag labeling and mass spectrometry. Tenascin C (TNC) was among the most abundant stromal genes, modulated by androgen levels in vivo and highly expressed in castration-resistant LAPC9 PDX. The tissue microarray of primary PCa samples (n = 210) showed that TNC is a negative prognostic marker of the clinical progression to recurrence or metastasis. Stroma markers of osteoblastic PCa bone metastases seven-up signature were induced in the stroma by the host organism in metastatic xenografts, indicating conserved mechanisms of tumor cells to induce a stromal premetastatic signature. A 50-gene list stroma signature was identified based on androgen-dependent responses, which shows a linear association with the Gleason score, metastasis progression and progression-free survival. Our data show that metastatic PCa PDXs, which differ in androgen sensitivity, trigger differential stroma responses, which show the metastasis risk stratification and prognostic biomarker potential. FAU - Karkampouna, Sofia AU - Karkampouna S AUID- ORCID: 0000-0002-1716-5237 AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. FAU - De Filippo, Maria R AU - De Filippo MR AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. FAU - Ng, Charlotte K Y AU - Ng CKY AUID- ORCID: 0000-0002-6100-0026 AD - Oncogenomics Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 40, 3008 Bern, Switzerland. FAU - Klima, Irena AU - Klima I AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. FAU - Zoni, Eugenio AU - Zoni E AUID- ORCID: 0000-0002-3070-7694 AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. FAU - Spahn, Martin AU - Spahn M AD - Lindenhofspital Bern, Prostate Center Bern, 3012 Bern, Switzerland. FAU - Stein, Frank AU - Stein F AD - Proteomics Core Facility, EMBL Heidelberg, Meyerhofstrasse 1, 69117 Heidelberg, Germany. FAU - Haberkant, Per AU - Haberkant P AUID- ORCID: 0000-0002-5608-9062 AD - Proteomics Core Facility, EMBL Heidelberg, Meyerhofstrasse 1, 69117 Heidelberg, Germany. FAU - Thalmann, George N AU - Thalmann GN AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. AD - Department of Urology, Inselspital, Anna Seiler Haus, Bern University Hospital, 3010 Bern, Switzerland. FAU - Kruithof-de Julio, Marianna AU - Kruithof-de Julio M AUID- ORCID: 0000-0002-6085-7706 AD - Urology Research Laboratory, Department for BioMedical Research, University of Bern, Murtenstrasse 35, 3008 Bern, Switzerland. AD - Department of Urology, Inselspital, Anna Seiler Haus, Bern University Hospital, 3010 Bern, Switzerland. LA - eng GR - 748836/European Union Horizon 2020, Research and Innovation, Marie Sklodowska-Curie/ PT - Journal Article DEP - 20201215 PL - Switzerland TA - Cancers (Basel) JT - Cancers JID - 101526829 PMC - PMC7768471 OTO - NOTNLM OT - patient-derived xenografts OT - prostate cancer OT - stroma signature COIS- The authors declare no conflict of interest. EDAT- 2020/12/19 06:00 MHDA- 2020/12/19 06:01 PMCR- 2020/12/15 CRDT- 2020/12/18 01:02 PHST- 2020/12/01 00:00 [received] PHST- 2020/12/10 00:00 [accepted] PHST- 2020/12/18 01:02 [entrez] PHST- 2020/12/19 06:00 [pubmed] PHST- 2020/12/19 06:01 [medline] PHST- 2020/12/15 00:00 [pmc-release] AID - cancers12123786 [pii] AID - cancers-12-03786 [pii] AID - 10.3390/cancers12123786 [doi] PST - epublish SO - Cancers (Basel). 2020 Dec 15;12(12):3786. doi: 10.3390/cancers12123786.