PMID- 33758895 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20231111 DP - 2021 Mar 12 TI - Rapid implementation of a cohort for the study of post-acute sequelae of SARS-CoV-2 infection/COVID-19. LID - 2021.03.11.21252311 [pii] LID - 10.1101/2021.03.11.21252311 [doi] AB - BACKGROUND: As the coronavirus disease 2019 (COVID-19) pandemic continues and millions remain vulnerable to infection with severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2), attention has turned to characterizing post-acute sequelae of SARS-CoV-2 infection (PASC). METHODS: From April 21 to December 31, 2020, we assembled a cohort of consecutive volunteers who a) had documented history of SARS-CoV-2 RNA-positivity; b) were >/= 2 weeks past onset of COVID-19 symptoms or, if asymptomatic, first test for SARS-CoV-2; and c) were able to travel to our site in San Francisco. Participants learned about the study by being identified on medical center-based registries and being notified or by responding to advertisements. At 4-month intervals, we asked participants about physical symptoms that were new or worse compared to the period prior to COVID-19, mental health symptoms and quality of life. We described 4 time periods: 1) acute illness (0-3 weeks), 2) early recovery (3-10 weeks), 3) late recovery 1 (12-20 weeks), and 4) late recovery 2 (28-36 weeks). Blood and oral specimens were collected at each visit. RESULTS: We have, to date, enrolled 179 adults. During acute SARS-CoV-2 infection, 10 had been asymptomatic, 125 symptomatic but not hospitalized, and 44 symptomatic and hospitalized. In the acute phase, the most common symptoms were fatigue, fever, myalgia, cough and anosmia/dysgeusia. During the post-acute phase, fatigue, shortness of breath, concentration problems, headaches, trouble sleeping and anosmia/dysgeusia were the most commonly reported symptoms, but a variety of others were endorsed by at least some participants. Some experienced symptoms of depression, anxiety, and post-traumatic stress, as well as difficulties with ambulation and performance of usual activities. The median visual analogue scale value rating of general health was lower at 4 and 8 months (80, interquartile range [IQR]: 70-90; and 80, IQR 75-90) compared to prior to COVID-19 (85; IQR 75-90). Biospecimens were collected at nearly 600 participant-visits. CONCLUSION: Among a cohort of participants enrolled in the post-acute phase of SARS-CoV-2 infection, we found many with persistent physical symptoms through 8 months following onset of COVID-19 with an impact on self-rated overall health. The presence of participants with and without symptoms and ample biological specimens will facilitate study of PASC pathogenesis. Similar evaluations in a population-representative sample will be needed to estimate the population-level prevalence of PASC. FAU - Peluso, Michael J AU - Peluso MJ AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Kelly, J Daniel AU - Kelly JD AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. AD - Department of Ophthalmology, University of California, San Francisco, USA. FAU - Lu, Scott AU - Lu S AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Goldberg, Sarah A AU - Goldberg SA AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Davidson, Michelle C AU - Davidson MC AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Mathur, Sujata AU - Mathur S AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Durstenfeld, Matthew S AU - Durstenfeld MS AD - Division of Cardiology, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Spinelli, Matthew A AU - Spinelli MA AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Hoh, Rebecca AU - Hoh R AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Tai, Viva AU - Tai V AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Fehrman, Emily A AU - Fehrman EA AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Torres, Leonel AU - Torres L AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. AD - Division of Experimental Medicine, University of California, San Francisco, USA. FAU - Hernandez, Yanel AU - Hernandez Y AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Williams, Meghann C AU - Williams MC AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Arreguin, Mireya I AU - Arreguin MI AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Bautista, Jennifer A AU - Bautista JA AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Ngo, Lynn H AU - Ngo LH AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Deswal, Monika AU - Deswal M AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Munter, Sadie E AU - Munter SE AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. AD - Division of Experimental Medicine, University of California, San Francisco, USA. FAU - Martinez, Enrique O AU - Martinez EO AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Anglin, Khamal A AU - Anglin KA AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Romero, Mariela D AU - Romero MD AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Tavs, Jacqueline AU - Tavs J AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Rugart, Paulina R AU - Rugart PR AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Chen, Jessica Y AU - Chen JY AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. AD - Division of Experimental Medicine, University of California, San Francisco, USA. FAU - Sans, Hannah M AU - Sans HM AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Murray, Victoria W AU - Murray VW AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Ellis, Payton K AU - Ellis PK AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Donohue, Kevin C AU - Donohue KC AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Massachi, Jonathan A AU - Massachi JA AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Weiss, Jacob O AU - Weiss JO AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Mehdi, Irum AU - Mehdi I AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Pineda-Ramirez, Jesus AU - Pineda-Ramirez J AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Tang, Alex F AU - Tang AF AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Wenger, Megan AU - Wenger M AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Assenzio, Melissa AU - Assenzio M AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Yuan, Yan AU - Yuan Y AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Krone, Melissa AU - Krone M AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. FAU - Rutishauser, Rachel L AU - Rutishauser RL AD - Division of Experimental Medicine, University of California, San Francisco, USA. FAU - Rodriguez-Barraquer, Isabel AU - Rodriguez-Barraquer I AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Greenhouse, Bryan AU - Greenhouse B AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Sauceda, John A AU - Sauceda JA AD - Center for AIDS Prevention Studies, University of California, San Francisco, USA. FAU - Gandhi, Monica AU - Gandhi M AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Hsue, Priscilla Y AU - Hsue PY AD - Division of Cardiology, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Henrich, Timothy J AU - Henrich TJ AD - Division of Experimental Medicine, University of California, San Francisco, USA. FAU - Deeks, Steven G AU - Deeks SG AD - Division of HIV, Infectious Diseases, and Global Medicine, Zuckerberg San Francisco General Hospital, University of California, San Francisco, USA. FAU - Martin, Jeffrey N AU - Martin JN AD - Department of Epidemiology and Biostatistics, University of California, San Francisco, USA. LA - eng GR - R01 AI158013/AI/NIAID NIH HHS/United States GR - T32 AI060530/AI/NIAID NIH HHS/United States GR - K23 AI146268/AI/NIAID NIH HHS/United States GR - K24 AI112393/AI/NIAID NIH HHS/United States GR - P30 AI027763/AI/NIAID NIH HHS/United States PT - Preprint DEP - 20210312 PL - United States TA - medRxiv JT - medRxiv : the preprint server for health sciences JID - 101767986 UIN - Open Forum Infect Dis. 2021 Dec 21;9(2):ofab640. PMID: 35106317 PMC - PMC7987054 EDAT- 2021/03/25 06:00 MHDA- 2021/03/25 06:01 PMCR- 2021/03/23 CRDT- 2021/03/24 06:50 PHST- 2021/03/24 06:50 [entrez] PHST- 2021/03/25 06:00 [pubmed] PHST- 2021/03/25 06:01 [medline] PHST- 2021/03/23 00:00 [pmc-release] AID - 2021.03.11.21252311 [pii] AID - 10.1101/2021.03.11.21252311 [doi] PST - epublish SO - medRxiv [Preprint]. 2021 Mar 12:2021.03.11.21252311. doi: 10.1101/2021.03.11.21252311.