PMID- 33790943 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20210402 IS - 1664-8021 (Print) IS - 1664-8021 (Electronic) IS - 1664-8021 (Linking) VI - 12 DP - 2021 TI - A Critical Role of Peptidylprolyl Isomerase A Pseudogene 22/microRNA-197-3p/Peptidylprolyl Isomerase A Axis in Hepatocellular Carcinoma. PG - 604461 LID - 10.3389/fgene.2021.604461 [doi] LID - 604461 AB - The burden of hepatocellular carcinoma (HCC) worldwide is increasing over time, while the underlying molecular mechanism of HCC development is still under exploration. Pseudogenes are classified as a special type of long non-coding RNAs (lncRNAs), and they played a vital role in regulating tumor-associated gene expression. Here, we report that a pseudogene peptidylprolyl isomerase A pseudogene 22 (PPIAP22) and its parental gene peptidylprolyl isomerase A (PPIA) were upregulated in HCC and were associated with the clinical outcomes of HCC. Further investigation revealed that PPIAP22 might upregulate the expression of PPIA through sponging microRNA (miR)-197-3p, behaving as competing endogenous RNA (ceRNA). PPIA could participate in the development of HCC by regulating mRNA metabolic process and tumor immunity based on the functional enrichment analysis. We also found a strong correlation between the expression levels of PPIA and the immune cell infiltration or the expression of chemokines, especially macrophage, C-C motif chemokine ligand 15 (CCL15), and C-X-C motif chemokine ligand 12 (CXCL12). Our findings demonstrate that the PPIAP22/miR-197-3p/PPIA axis plays a vital role in the progression of HCC by increasing the malignancy of tumor cells and regulating the immune cell infiltration, especially macrophage, through CCL15-CCR1 or CXCL12-CXCR4/CXCR7 pathways. CI - Copyright (c) 2021 Gu, Wang, Chen, Tang, Guo, Hu, Cui, Zhang, Yu and Chen. FAU - Gu, Yuwei AU - Gu Y AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. FAU - Wang, Chao AU - Wang C AD - Emergency Department, Huashan Hospital, Shanghai, China. FAU - Chen, Shengsen AU - Chen S AD - Department of Endoscopy, Cancer Hospital of the University of Chinese Academy of Sciences (Zhejiang Cancer Hospital), Hangzhou, China. AD - Institute of Cancer and Basic Medicine (IBMC), Chinese Academy of Sciences, Hangzhou, China. FAU - Tang, Jia AU - Tang J AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. FAU - Guo, Xiaoxiao AU - Guo X AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. FAU - Hu, Wei AU - Hu W AD - Shanghai Medical College of Fudan University, Shanghai, China. FAU - Cui, An AU - Cui A AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. FAU - Zhang, Dian AU - Zhang D AD - Emergency Department, Huashan Hospital, Shanghai, China. FAU - Yu, Kangkang AU - Yu K AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. FAU - Chen, Mingquan AU - Chen M AD - Department of Infectious Diseases, Huashan Hospital, Shanghai, China. AD - Emergency Department, Huashan Hospital, Shanghai, China. LA - eng PT - Journal Article DEP - 20210315 PL - Switzerland TA - Front Genet JT - Frontiers in genetics JID - 101560621 PMC - PMC8006304 OTO - NOTNLM OT - PPIA OT - chemokine OT - hepatocellular carcinoma OT - macrophage OT - pseudogene COIS- The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The reviewers YC and C-YW declared a shared affiliation, with no collaboration, with several of the authors YG, CW, JT, XG, WH, AC, DZ, KY, and MC to the handling editor at the time of the review. EDAT- 2021/04/02 06:00 MHDA- 2021/04/02 06:01 PMCR- 2021/03/15 CRDT- 2021/04/01 06:26 PHST- 2020/09/09 00:00 [received] PHST- 2021/02/26 00:00 [accepted] PHST- 2021/04/01 06:26 [entrez] PHST- 2021/04/02 06:00 [pubmed] PHST- 2021/04/02 06:01 [medline] PHST- 2021/03/15 00:00 [pmc-release] AID - 10.3389/fgene.2021.604461 [doi] PST - epublish SO - Front Genet. 2021 Mar 15;12:604461. doi: 10.3389/fgene.2021.604461. eCollection 2021.