PMID- 34693295 OWN - NLM STAT- PubMed-not-MEDLINE LR - 20211028 IS - 2643-4539 (Electronic) IS - 2643-4539 (Linking) VI - 4 IP - 1 DP - 2021 TI - Fragmentation of Apolipoprotein E4 is Required for Differential Expression of Inflammation and Activation Related Genes in Microglia Cells. LID - 020 [pii] LID - 10.23937/2643-4539/1710020 [doi] AB - The apolipoprotein E4 (APOE4) allele represents the single greatest risk factor for late-onset Alzheimer's disease (AD) and accumulating evidence suggests that fragmentation with a toxic-gain of function may be a key molecular step associated with this risk. Recently, we demonstrated strong immunoreactivity of a 151 amino-terminal fragment of apoE4 (E4-fragment) within the nucleus of microglia in the human AD brain. In vitro, this fragment led to toxicity and activation of inflammatory processes in BV2 microglia cells. Additionally, a transcriptome analysis following exogenous treatment of BV2 microglia cells with this E4 fragment led to a > 2-fold up regulation of 1,608 genes, with many genes playing a role in inflammation and microglia activation. To extend these findings, we here report a similar transcriptome analysis in BV2 microglia cells following treatment with full-length ApoE4 (FL-ApoE4). The results indicated that full-length ApoE4 had a very small effect on gene expression compared to the fragment. Only 48 differentially expressed genes (DEGs) were identified (p < 0.05, and greater than 2-fold change). A gene ontology analysis of these DEGs indicated that they are not involved in inflammatory and activation processes, in contrast to the genes up regulated by the E4-fragment. In addition, genes that showed a negative fold-change upon FL-E4 treatment typically showed a strong positive fold-change upon treatment with the fragment (Pearson's r = -0.7). Taken together, these results support the hypothesis that a key step in the conversion of microglia to an activated phenotype is proteolytic cleavage of FL-ApoE4. Therefore, the neutralization of this amino-terminal fragment of ApoE4, specifically, may serve as an important therapeutic strategy in the treatment of AD. FAU - Rohn, Troy T AU - Rohn TT AD - Department of Biological Sciences, Boise State University, USA. FAU - Beck, James D AU - Beck JD AD - Department of Biological Sciences, Boise State University, USA. FAU - Galla, Stephanie J AU - Galla SJ AD - Department of Biological Sciences, Boise State University, USA. FAU - Isho, Noail F AU - Isho NF AD - University of Washington School of Medicine, University of Washington, USA. FAU - Pollock, Tanner B AU - Pollock TB AD - Department of Biological Sciences, Boise State University, USA. FAU - Suresh, Tarun AU - Suresh T AD - Department of Biological Sciences, Boise State University, USA. FAU - Kulkarni, Arni AU - Kulkarni A AD - Department of Biological Sciences, Boise State University, USA. FAU - Sanghal, Tanya AU - Sanghal T AD - Department of Biological Sciences, Boise State University, USA. FAU - Hayden, Eric J AU - Hayden EJ AD - Department of Biological Sciences, Boise State University, USA. LA - eng GR - P20 GM103408/GM/NIGMS NIH HHS/United States GR - P20 GM109095/GM/NIGMS NIH HHS/United States GR - R15 AG042781/AG/NIA NIH HHS/United States PT - Journal Article DEP - 20210910 PL - United States TA - Int J Neurodegener Dis JT - International journal of neurodegenerative disorders JID - 101723137 PMC - PMC8529910 MID - NIHMS1745767 OTO - NOTNLM OT - Alzheimer's disease OT - Apolipoprotein E4 OT - BV2 cells OT - Fragment of ApoE4 OT - Inflammation OT - Microglia cells OT - RNA-seq OT - Toxicity OT - Transcriptome analysis COIS- Conflicts of Interest The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. EDAT- 2021/10/26 06:00 MHDA- 2021/10/26 06:01 PMCR- 2021/10/21 CRDT- 2021/10/25 06:47 PHST- 2021/10/25 06:47 [entrez] PHST- 2021/10/26 06:00 [pubmed] PHST- 2021/10/26 06:01 [medline] PHST- 2021/10/21 00:00 [pmc-release] AID - 020 [pii] AID - 10.23937/2643-4539/1710020 [doi] PST - ppublish SO - Int J Neurodegener Dis. 2021;4(1):020. doi: 10.23937/2643-4539/1710020. Epub 2021 Sep 10.