PMID- 34787621 OWN - NLM STAT- MEDLINE DCOM- 20211129 LR - 20211129 IS - 2040-3372 (Electronic) IS - 2040-3364 (Linking) VI - 13 IP - 45 DP - 2021 Nov 25 TI - Potential interference of graphene nanosheets in immune response via disrupting the recognition of HLA-presented KK10 by TCR: a molecular dynamics simulation study. PG - 19255-19263 LID - 10.1039/d1nr05267e [doi] AB - Graphene and its derivatives have emerged as a promising nanomaterial in biomedical applications. However, their impact on biosafety continues to be a concern in the field, particularly, their potential cytotoxicity to our immune system. In this study, we used all-atom molecular dynamics simulations to investigate the potential interference of graphene nanosheets in antigen presentation and recognition in immune response. For the illustrated human immunodeficiency virus (HIV) antigen peptide KK10, human leukocyte antigen (HLA), and T cell receptor (TCR) ternary complex, we found that the graphene nanosheet could disrupt the critical protein-protein interactions between TCR and peptide-HLA and impair the antigen recognition by TCR, leaving the antigen presentation unaffected. Moreover, the hydrophobic interaction and van der Waals potential energy collectively drive the spontaneous separation of TCR from the peptide-HLA complex by graphene nanosheets. Our findings demonstrated theoretically how the graphene nanosheet could interfere with the immune response and provided useful insights for reducing the risk of graphene-based nanomaterials in biomedical applications. FAU - Ye, Rui AU - Ye R AD - Institute of Quantitative Biology, Department of Physics, and College of Life Sciences, Zhejiang University, Hangzhou 310027, China. rhzhou@zju.edu.cn. FAU - Song, Wei AU - Song W AD - Institute of Quantitative Biology, Department of Physics, and College of Life Sciences, Zhejiang University, Hangzhou 310027, China. rhzhou@zju.edu.cn. FAU - Feng, Mei AU - Feng M AD - Institute of Quantitative Biology, Department of Physics, and College of Life Sciences, Zhejiang University, Hangzhou 310027, China. rhzhou@zju.edu.cn. AD - Lanzhou Center for Theoretical Physics, Key Laboratory of Theoretical Physics of Gansu Province, Lanzhou University, Lanzhou, Gansu 730000, China. FAU - Zhou, Ruhong AU - Zhou R AUID- ORCID: 0000-0001-8624-5591 AD - Institute of Quantitative Biology, Department of Physics, and College of Life Sciences, Zhejiang University, Hangzhou 310027, China. rhzhou@zju.edu.cn. AD - Department of Chemistry, Columbia University, New York, 10027, USA. LA - eng PT - Journal Article DEP - 20211125 PL - England TA - Nanoscale JT - Nanoscale JID - 101525249 RN - 0 (HLA Antigens) RN - 0 (Histocompatibility Antigens Class I) RN - 0 (Receptors, Antigen, T-Cell) RN - 7782-42-5 (Graphite) SB - IM MH - Antigen Presentation MH - *Graphite MH - HLA Antigens MH - Histocompatibility Antigens Class I MH - Humans MH - *Molecular Dynamics Simulation MH - Receptors, Antigen, T-Cell EDAT- 2021/11/18 06:00 MHDA- 2021/11/30 06:00 CRDT- 2021/11/17 12:22 PHST- 2021/11/18 06:00 [pubmed] PHST- 2021/11/30 06:00 [medline] PHST- 2021/11/17 12:22 [entrez] AID - 10.1039/d1nr05267e [doi] PST - epublish SO - Nanoscale. 2021 Nov 25;13(45):19255-19263. doi: 10.1039/d1nr05267e.