PMID- 34860572 OWN - NLM STAT- MEDLINE DCOM- 20220221 LR - 20230403 IS - 1527-7755 (Electronic) IS - 0732-183X (Print) IS - 0732-183X (Linking) VI - 40 IP - 4 DP - 2022 Feb 1 TI - Impact of TP53 Genomic Alterations in Large B-Cell Lymphoma Treated With CD19-Chimeric Antigen Receptor T-Cell Therapy. PG - 369-381 LID - 10.1200/JCO.21.02143 [doi] AB - PURPOSE: Tumor-intrinsic features may render large B-cell lymphoma (LBCL) insensitive to CD19-directed chimeric antigen receptor T cells (CAR-T). We hypothesized that TP53 genomic alterations are detrimental to response outcomes in LBCL treated with CD19-CAR-T. MATERIALS AND METHODS: Patients with LBCL treated with CD19-CAR-T were included. Targeted next-generation sequencing was performed on pre-CAR-T tumor samples in a subset of patients. Response and survival rates by histologic, cytogenetic, and molecular features were assessed. Within a cohort of newly diagnosed LBCL with genomic and transcriptomic profiling, we studied interactions between cellular pathways and TP53 status. RESULTS: We included 153 adults with relapsed or refractory LBCL treated with CD19-CAR-T (axicabtagene ciloleucel [50%], tisagenlecleucel [32%], and lisocabtagene maraleucel [18%]). Outcomes echoed pivotal trials: complete response (CR) rate 54%, median overall survival (OS) 21.1 months (95% CI, 14.8 to not reached), and progression-free survival 6 months (3.4 to 9.7). Histologic and cytogenetic LBCL features were not predictive of CR. In a subset of 82 patients with next-generation sequencing profiling, CR and OS rates were comparable with the unsequenced cohort. TP53 alterations (mutations and/or copy number alterations) were common (37%) and associated with inferior CR and OS rates in univariable and multivariable regression models; the 1-year OS in TP53-altered LBCL was 44% (95% CI, 29 to 67) versus 76% (65 to 89) in wild-type (P = .012). Transcriptomic profiling from a separate cohort of patients with newly diagnosed lymphoma (n = 562) demonstrated that TP53 alterations are associated with dysregulation of pathways related to CAR-T-cell cytotoxicity, including interferon and death receptor signaling pathway and reduced CD8 T-cell tumor infiltration. CONCLUSION: TP53 is a potent tumor-intrinsic biomarker that can inform risk stratification and clinical trial design in patients with LBCL treated with CD19-CAR-T. The role of TP53 should be further validated in independent cohorts. FAU - Shouval, Roni AU - Shouval R AUID- ORCID: 0000-0001-9827-8032 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Alarcon Tomas, Ana AU - Alarcon Tomas A AUID- ORCID: 0000-0002-6290-1061 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Cell Therapy and Translational Medicine, University of Murcia, Murcia, Spain. FAU - Fein, Joshua A AU - Fein JA AUID- ORCID: 0000-0001-5441-1516 AD - University of Connecticut Medical Center, Farmington, CT. FAU - Flynn, Jessica R AU - Flynn JR AUID- ORCID: 0000-0001-8310-6684 AD - Department of Biostatistics and Epidemiology, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Markovits, Ettai AU - Markovits E AUID- ORCID: 0000-0001-9817-0638 AD - Ella Lemelbaum Institute for Immuno-Oncology and Melanoma, Chaim Sheba Medical Center, Ramat Gan, Israel. FAU - Mayer, Shimrit AU - Mayer S AD - Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel. FAU - Olaide Afuye, Aishat AU - Olaide Afuye A AUID- ORCID: 0000-0002-5751-3283 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Alperovich, Anna AU - Alperovich A AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Anagnostou, Theodora AU - Anagnostou T AUID- ORCID: 0000-0003-2142-7356 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Department of Hematology and Medical Oncology, and Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, NY. FAU - Besser, Michal J AU - Besser MJ AD - Ella Lemelbaum Institute for Immuno-Oncology and Melanoma, Chaim Sheba Medical Center, Ramat Gan, Israel. AD - Department of Clinical Microbiology & Immunology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. FAU - Batlevi, Connie Lee AU - Batlevi CL AUID- ORCID: 0000-0002-9036-9463 AD - Weill Cornell Medical College, New York, NY. AD - Department of Medicine, Lymphoma Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Dahi, Parastoo B AU - Dahi PB AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Devlin, Sean M AU - Devlin SM AUID- ORCID: 0000-0002-6801-720X AD - Department of Biostatistics and Epidemiology, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Fingrut, Warren B AU - Fingrut WB AUID- ORCID: 0000-0002-5017-1583 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Giralt, Sergio A AU - Giralt SA AUID- ORCID: 0000-0003-1944-5053 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Lin, Richard J AU - Lin RJ AUID- ORCID: 0000-0002-0834-7880 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Markel, Gal AU - Markel G AD - Department of Clinical Microbiology & Immunology, Sackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel. AD - Davidoff Cancer Center, Rabin Medical Center-Beilinson Hospital, Petah Tikva, Sackler School of Medicine, Tel Aviv University, Tel Aviv, Israel. FAU - Salles, Gilles AU - Salles G AUID- ORCID: 0000-0002-9541-8666 AD - Weill Cornell Medical College, New York, NY. AD - Department of Medicine, Lymphoma Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Sauter, Craig S AU - Sauter CS AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Scordo, Michael AU - Scordo M AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Shah, Gunjan L AU - Shah GL AUID- ORCID: 0000-0002-9977-0456 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Shah, Nishi AU - Shah N AUID- ORCID: 0000-0002-4723-6745 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. FAU - Scherz-Shouval, Ruth AU - Scherz-Shouval R AUID- ORCID: 0000-0002-4570-121X AD - Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel. FAU - van den Brink, Marcel AU - van den Brink M AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Perales, Miguel-Angel AU - Perales MA AUID- ORCID: 0000-0002-5910-4571 AD - Department of Medicine, Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York, NY. AD - Weill Cornell Medical College, New York, NY. FAU - Palomba, Maria Lia AU - Palomba ML AUID- ORCID: 0000-0001-5099-9156 AD - Weill Cornell Medical College, New York, NY. AD - Department of Medicine, Lymphoma Service, Memorial Sloan Kettering Cancer Center, New York, NY. LA - eng GR - P30 CA008748/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't DEP - 20211203 PL - United States TA - J Clin Oncol JT - Journal of clinical oncology : official journal of the American Society of Clinical Oncology JID - 8309333 RN - 0 (Antigens, CD19) RN - 0 (Biological Products) RN - 0 (Biomarkers, Tumor) RN - 0 (CD19 molecule, human) RN - 0 (Receptors, Antigen, T-Cell) RN - 0 (Receptors, Chimeric Antigen) RN - 0 (TP53 protein, human) RN - 0 (Tumor Suppressor Protein p53) RN - Q6C9WHR03O (tisagenlecleucel) RN - U2I8T43Y7R (axicabtagene ciloleucel) SB - IM MH - Aged MH - Antigens, CD19/*immunology MH - Biological Products/therapeutic use MH - Biomarkers, Tumor/*genetics MH - DNA Copy Number Variations MH - Female MH - Gene Dosage MH - Gene Expression Profiling MH - High-Throughput Nucleotide Sequencing MH - Humans MH - *Immunotherapy, Adoptive/adverse effects/mortality MH - Lymphoma, B-Cell/genetics/immunology/mortality/*therapy MH - Male MH - Middle Aged MH - Mutation MH - Predictive Value of Tests MH - Receptors, Antigen, T-Cell/therapeutic use MH - Receptors, Chimeric Antigen/genetics/*immunology MH - Retrospective Studies MH - Risk Assessment MH - Risk Factors MH - T-Lymphocytes/immunology/*transplantation MH - Time Factors MH - Treatment Outcome MH - Tumor Suppressor Protein p53/*genetics PMC - PMC8797602 COIS- Roni ShouvalConsulting or Advisory Role: Medexus, MyBiotics Michal J. BesserEmployment: Envizion Medical (I)Leadership: Envizion Medical (I)Stock and Other Ownership Interests: Envizion Medical (I)Consulting or Advisory Role: Biological Industries (a Sartorius Company), Gilboa TherapeuticsPatents, Royalties, Other Intellectual Property: Patents at Envizion Medical (I), Royalties at Biological Industries (Inst)Travel, Accommodations, Expenses: Lonza Connie Lee BatleviStock and Other Ownership Interests: Moderna Therapeutics, Novavax, Pfizer, Bristol Myers Squibb, Regeneron, ViatrisHonoraria: DAVA OncologyConsulting or Advisory Role: LifeSci Capital, GLG, Juno Therapeutics, Celgene, Seattle Genetics, Kite, a Gilead company, TG Therapeutics, Karyopharm TherapeuticsResearch Funding: Janssen Biotech (Inst), Novartis (Inst), Epizyme (Inst), Xynomic Pharma (Inst), Bayer (Inst), Roche (Inst), Autolus (Inst)Open Payments Link: https://openpaymentsdata.cms.gov/physician/2778694 Parastoo B. DahiConsulting or Advisory Role: Kite, a Gilead company Sean M. DevlinThis author is a member of the Journal of Clinical Oncology Editorial Board. Journal policy recused the author from having any role in the peer review of this manuscript. Sergio A. GiraltHonoraria: Celgene, Takeda, Amgen, Jazz Pharmaceuticals, Sanofi,Consulting or Advisory Role: Celgene, Takeda, Sanofi, Jazz Pharmaceuticals, Amgen, Janssen, Actinuum, Bristol Myers Squibb, Johnson & Johnson, PfizerResearch Funding: Celgene (Inst), Miltenyi Biotec, Johnson & Johnson, Amgen, Actinuum, SanofiTravel, Accommodations, Expenses: Celgene, Sanofi, Amgen, Jazz Pharmaceuticals Richard J. LinEmployment: Pfizer (I)Consulting or Advisory Role: Kite/Gilead Gal MarkelEmployment: 4C Biomed, Ella TherapeuticsLeadership: 4C Biomed, Ella TherapeuticsStock and Other Ownership Interests: Purple Biotech, Biond Biologics, Nucleai, Staburo GmbH, Ella Therapeutics, 4C BiomedHonoraria: BMS, MSD, Novartis, Medison, RocheConsulting or Advisory Role: MSD, NovartisSpeakers' Bureau: MSD, BMSResearch Funding: Novartis (Inst), Immunicom (Inst)Patents, Royalties, Other Intellectual Property: Patent on anti-CEACAM1 blocking antibodiesTravel, Accommodations, Expenses: BMS, Novartis, MSD Gilles SallesHonoraria: Roche/Genentech, Janssen, Celgene, Gilead Sciences, Novartis, AbbVie, MorphoSysConsulting or Advisory Role: Roche/Genentech, Gilead Sciences, Janssen, Celgene, Novartis, MorphoSys, Epizyme, Alimera Sciences, Genmab, Debiopharm Group, Velosbio, BMS, BeiGene, Incyte, Miltenyi Biotec, Ipsen Craig S. SauterConsulting or Advisory Role: Spectrum Pharmaceuticals, Juno Therapeutics, Sanofi, Gilead Sciences, Novartis Precision BioSciences, Gamida Cell, Karyopharm Therapeutics, GlaxoSmithKline, GenmabResearch Funding: Juno Therapeutics (Inst), Sanofi (Inst), Precision BioSciences (Inst), BMS (Inst), Actinium Pharmaceuticals (Inst)Travel, Accommodations, Expenses: Juno Therapeutics, Sanofi, Gilead Sciences, Novartis Michael ScordoHonoraria: i3 CMEConsulting or Advisory Role: McKinsey & Company, Angiocrine Bioscience, OmerosResearch Funding: Angiocrine Bioscience, Omeros (Inst)Travel, Accommodations, Expenses: Kite/Gilead Gunjan L. ShahResearch Funding: Amgen (Inst), Janssen (Inst) Marcel van den BrinkHonoraria: Seres Therapeutics, Merck, Magenta Therapeutics, WindMIL, Rheos Medicines, Frazier Healthcare Partners, Nektar, Notch Therapeutics, Forty Seven, Priothera, Ceramedix, LyGenesis, Pluto Therapeutics, GlaxoSmithKline, Da Volterra, Novartis (I), Synthekine (I), BeiGene (I)Consulting or Advisory Role: Seres TherapeuticsResearch Funding: Seres TherapeuticsPatents, Royalties, Other Intellectual Property: Dr van den Brink receives royalties from Wolters Kluwer, and he has intellectual property Licensing with Seres Therapeutics and Juno TherapeuticsTravel, Accommodations, Expenses: Rheos MedicinesOther Relationship: DKMSUncompensated Relationships: Seres therapeutics, Notch Therapeutics, Pluto Therapeutics Miguel-Angel PeralesStock and Other Ownership Interests: NexImmuneHonoraria: MorphoSysConsulting or Advisory Role: Incyte, Merck, Servier/Pfizer, NexImmune, Novartis, MolMed, Medigene, Takeda, Nektar, AbbVie, Cidara Therapeutics, Celgene, Kite/Gilead, Bristol Myers Squibb, Omeros, Vor BiopharmaResearch Funding: Incyte (Inst), Miltenyi Biotec (Inst), Novartis (Inst), Kite, a Gilead company (Inst), Nektar (Inst) Maria Lia PalombaStock and Other Ownership Interests: Seres Therapeutics (I)Honoraria: Flagship Biosciences (I), Evelo Therapeutics (I), Jazz Pharmaceuticals (I), Therakos (I), Amgen (I), Merck (I), Seres Therapeutics (I)Consulting or Advisory Role: Flagship Biosciences (I), Novartis (I), Evelo Therapeutics (I), Jazz Pharmaceuticals (I), Therakos (I), Amgen (I), Merck (I), Seres Therapeutics (I), Kite, a Gilead company, Novartis, BeiGene, SynthekineResearch Funding: Seres Therapeutics (I)Patents, Royalties, Other Intellectual Property: Intellectual Property Rights (I), Juno intellectual property rights (Inst)No other potential conflicts of interest were reported. EDAT- 2021/12/04 06:00 MHDA- 2022/02/22 06:00 PMCR- 2023/02/01 CRDT- 2021/12/03 17:16 PHST- 2021/12/04 06:00 [pubmed] PHST- 2022/02/22 06:00 [medline] PHST- 2021/12/03 17:16 [entrez] PHST- 2023/02/01 00:00 [pmc-release] AID - JCO.21.02143 [pii] AID - 10.1200/JCO.21.02143 [doi] PST - ppublish SO - J Clin Oncol. 2022 Feb 1;40(4):369-381. doi: 10.1200/JCO.21.02143. Epub 2021 Dec 3.