PMID- 34893889 OWN - NLM STAT- MEDLINE DCOM- 20220217 LR - 20220217 IS - 1362-4962 (Electronic) IS - 0305-1048 (Print) IS - 0305-1048 (Linking) VI - 50 IP - 1 DP - 2022 Jan 11 TI - Coordinated glucocorticoid receptor and MAFB action induces tolerogenesis and epigenome remodeling in dendritic cells. PG - 108-126 LID - 10.1093/nar/gkab1182 [doi] AB - Glucocorticoids (GCs) exert potent anti-inflammatory effects in immune cells through the glucocorticoid receptor (GR). Dendritic cells (DCs), central actors for coordinating immune responses, acquire tolerogenic properties in response to GCs. Tolerogenic DCs (tolDCs) have emerged as a potential treatment for various inflammatory diseases. To date, the underlying cell type-specific regulatory mechanisms orchestrating GC-mediated acquisition of immunosuppressive properties remain poorly understood. In this study, we investigated the transcriptomic and epigenomic remodeling associated with differentiation to DCs in the presence of GCs. Our analysis demonstrates a major role of MAFB in this process, in synergy with GR. GR and MAFB both interact with methylcytosine dioxygenase TET2 and bind to genomic loci that undergo specific demethylation in tolDCs. We also show that the role of MAFB is more extensive, binding to thousands of genomic loci in tolDCs. Finally, MAFB knockdown erases the tolerogenic properties of tolDCs and reverts the specific DNA demethylation and gene upregulation. The preeminent role of MAFB is also demonstrated in vivo for myeloid cells from synovium in rheumatoid arthritis following GC treatment. Our results imply that, once directly activated by GR, MAFB plays a critical role in orchestrating the epigenomic and transcriptomic remodeling that define the tolerogenic phenotype. CI - (c) The Author(s) 2021. Published by Oxford University Press on behalf of Nucleic Acids Research. FAU - Morante-Palacios, Octavio AU - Morante-Palacios O AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. AD - Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Barcelona, Spain. FAU - Ciudad, Laura AU - Ciudad L AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. FAU - Micheroli, Raphael AU - Micheroli R AD - Center of Experimental Rheumatology, Department of Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland. FAU - de la Calle-Fabregat, Carlos AU - de la Calle-Fabregat C AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. FAU - Li, Tianlu AU - Li T AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. FAU - Barbisan, Gisela AU - Barbisan G AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. FAU - Houtman, Miranda AU - Houtman M AD - Center of Experimental Rheumatology, Department of Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland. FAU - Edalat, Sam G AU - Edalat SG AD - Center of Experimental Rheumatology, Department of Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland. FAU - Frank-Bertoncelj, Mojca AU - Frank-Bertoncelj M AD - Center of Experimental Rheumatology, Department of Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland. FAU - Ospelt, Caroline AU - Ospelt C AD - Center of Experimental Rheumatology, Department of Rheumatology, University Hospital Zurich, University of Zurich, Zurich, Switzerland. FAU - Ballestar, Esteban AU - Ballestar E AUID- ORCID: 0000-0002-1400-2440 AD - Epigenetics and Immune Disease Group, Josep Carreras Research Institute (IJC), 08916 Badalona, Barcelona, Spain. AD - Germans Trias i Pujol Research Institute (IGTP), 08916 Badalona, Barcelona, Spain. LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - England TA - Nucleic Acids Res JT - Nucleic acids research JID - 0411011 RN - 0 (DNA-Binding Proteins) RN - 0 (MAFB protein, human) RN - 0 (MafB Transcription Factor) RN - 0 (Receptors, Glucocorticoid) RN - EC 1.13.11.- (Dioxygenases) RN - EC 1.13.11.- (TET2 protein, human) SB - IM MH - Adult MH - Cells, Cultured MH - DNA Methylation MH - DNA-Binding Proteins/metabolism MH - Dendritic Cells/*immunology MH - Dioxygenases/metabolism MH - *Epigenesis, Genetic MH - Female MH - Humans MH - *Immune Tolerance MH - MafB Transcription Factor/genetics/*metabolism MH - Male MH - Middle Aged MH - Receptors, Glucocorticoid/*metabolism PMC - PMC8754638 EDAT- 2021/12/12 06:00 MHDA- 2022/02/19 06:00 PMCR- 2021/12/10 CRDT- 2021/12/11 06:14 PHST- 2021/11/16 00:00 [accepted] PHST- 2021/11/08 00:00 [revised] PHST- 2021/09/20 00:00 [received] PHST- 2021/12/12 06:00 [pubmed] PHST- 2022/02/19 06:00 [medline] PHST- 2021/12/11 06:14 [entrez] PHST- 2021/12/10 00:00 [pmc-release] AID - 6459126 [pii] AID - gkab1182 [pii] AID - 10.1093/nar/gkab1182 [doi] PST - ppublish SO - Nucleic Acids Res. 2022 Jan 11;50(1):108-126. doi: 10.1093/nar/gkab1182.