PMID- 35064090 OWN - NLM STAT- MEDLINE DCOM- 20220228 LR - 20220722 IS - 1091-6490 (Electronic) IS - 0027-8424 (Print) IS - 0027-8424 (Linking) VI - 119 IP - 4 DP - 2022 Jan 25 TI - A large fraction of trisomy 12, 17p(-), and 11q(-) CLL cases carry unidentified microdeletions of miR-15a/16-1. LID - 10.1073/pnas.2118752119 [doi] LID - e2118752119 AB - Chronic lymphocytic leukemia (CLL) is the most common adult leukemia and is characterized by chromosomal aberrations including 13q, 11q, and 17p deletions and a trisomy of chromosome 12 (T12). 13q deletions are often associated with 11q and 17p deletions in aggressive cases. Conversely, T12 CLLs show a variable prognosis, and association with 13q deletions is uncommon. The miR-15a/16-1 cluster is the functional target of 13q deletions, leading to BCL2 overexpression. Chromosomal aberrations in CLL are associated with prognosis, and their identification is carried out by fluorescence in situ hybridization (FISH). Since standard FISH only detects large deletions, we investigated the presence of undetected microdeletions targeting miR-15a/16-1 in CLL cases. We found that approximately 34% of CLL samples show an unreported loss of the miR-15a/16-1 locus regardless of their cytogenetic profile. Interestingly, 15 out of 39 ( approximately 39%) of all CLLs with T12, carry microdeletions of miR-15a/16-1, indicating that, in patients with T12, miR-15a/16-1 are mostly inactivated by microdeletions. In addition, approximately 40% of CLL cases bearing T12, 17p(-), and 11q(-) showed unidentified microdeletions of miR-15a/16-1, suggesting that miR-15a/16-1 loss cooperates with such chromosomal alterations in CLL. These data may have clinical relevance for the successful stratification of patients for treatment. CI - Copyright (c) 2022 the Author(s). Published by PNAS. FAU - Pepe, Felice AU - Pepe F AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. FAU - Rassenti, Laura Z AU - Rassenti LZ AD - Department of Medicine, University of California San Diego, La Jolla, CA 92093. FAU - Pekarsky, Yuri AU - Pekarsky Y AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. FAU - Labanowska, Jadwiga AU - Labanowska J AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. AD - Department of Pathology, The Ohio State University, Columbus, OH 43210. FAU - Nakamura, Tatsuya AU - Nakamura T AUID- ORCID: 0000-0002-9011-6001 AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. FAU - Nigita, Giovanni AU - Nigita G AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. FAU - Kipps, Thomas J AU - Kipps TJ AD - Department of Medicine, University of California San Diego, La Jolla, CA 92093. FAU - Balatti, Veronica AU - Balatti V AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210; veronica.balatti@osumc.edu carlo.croce@osumc.edu. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. FAU - Croce, Carlo M AU - Croce CM AUID- ORCID: 0000-0003-3788-1457 AD - Department of Cancer Biology and Genetics, The Ohio State University, Columbus, OH 43210; veronica.balatti@osumc.edu carlo.croce@osumc.edu. AD - Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210. LA - eng GR - R35 CA197706/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, N.I.H., Extramural PT - Research Support, Non-U.S. Gov't PL - United States TA - Proc Natl Acad Sci U S A JT - Proceedings of the National Academy of Sciences of the United States of America JID - 7505876 RN - 0 (MIRN15 microRNA, human) RN - 0 (MIRN16 microRNA, human) RN - 0 (MicroRNAs) SB - IM MH - *Chromosome Deletion MH - *Chromosomes, Human, Pair 11 MH - *Chromosomes, Human, Pair 12 MH - *Chromosomes, Human, Pair 17 MH - DNA Copy Number Variations MH - Genetic Association Studies MH - Genetic Predisposition to Disease MH - Humans MH - In Situ Hybridization, Fluorescence MH - Leukemia, Lymphocytic, Chronic, B-Cell/diagnosis/*genetics MH - MicroRNAs/*genetics MH - *Trisomy PMC - PMC8794880 OTO - NOTNLM OT - 13q deletion OT - CLL OT - miR-15a/16-1 OT - trisomy 12 COIS- The authors declare no competing interest. EDAT- 2022/01/23 06:00 MHDA- 2022/03/01 06:00 PMCR- 2022/07/21 CRDT- 2022/01/22 05:43 PHST- 2021/12/21 00:00 [accepted] PHST- 2022/01/22 05:43 [entrez] PHST- 2022/01/23 06:00 [pubmed] PHST- 2022/03/01 06:00 [medline] PHST- 2022/07/21 00:00 [pmc-release] AID - 2118752119 [pii] AID - 202118752 [pii] AID - 10.1073/pnas.2118752119 [doi] PST - ppublish SO - Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2118752119. doi: 10.1073/pnas.2118752119.