PMID- 35688861 OWN - NLM STAT- MEDLINE DCOM- 20220614 LR - 20220809 IS - 2045-2322 (Electronic) IS - 2045-2322 (Linking) VI - 12 IP - 1 DP - 2022 Jun 10 TI - FISH improves risk stratification in acute leukemia by identifying KMT2A abnormal copy number and rearrangements. PG - 9585 LID - 10.1038/s41598-022-13545-y [doi] LID - 9585 AB - Most cases of acute leukemia (AL) with KMT2A rearrangement (KMT2A-r) have a dismal prognosis. Detection of this aberration in Chinese adult patients relies on reverse transcription polymerase chain reaction (RT-PCR) and chromosome banding analysis (CBA). The fluorescence in situ hybridization (FISH) probe for KMT2A detects KMT2A-r and copy number variation (CNV) but is not routinely used as a detection technique. This study investigated the potential value of FISH in the treatment of AL by performing FISH along with CBA and RT-PCR in 269 de novo cases of AL. The three detection techniques were compared in identification of KMT2A-r, and the applicability of FISH for detecting KMT2A CNV was evaluated. Twenty-three samples were identified as positive for KMT2A-r (20 using FISH, 15 using RT-PCR, 16 using CBA, and eight according to all three). FISH also identified 17 KMT2A CNV, 15 with gains and two with deletions. Ten patients with acute myeloid leukemia (AML) harboring KMT2A CNV had a complex karyotype, a negative prognostic factor in AML. Adding FISH of KMT2A to routine detection leads to more accurate detection of KMT2A-r and improved identification of KMT2A CNV, which would benefit patients by improving the risk stratification in AL. CI - (c) 2022. The Author(s). FAU - Li, Qinlu AU - Li Q AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. FAU - Xing, Shugang AU - Xing S AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. FAU - Zhang, Heng AU - Zhang H AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. FAU - Mao, Xia AU - Mao X AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. FAU - Xiao, Min AU - Xiao M AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. FAU - Wang, Ying AU - Wang Y AD - Department of Hematology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, 430030, China. bluewy629@163.com. LA - eng PT - Journal Article DEP - 20220610 PL - England TA - Sci Rep JT - Scientific reports JID - 101563288 RN - 149025-06-9 (Myeloid-Lymphoid Leukemia Protein) SB - IM MH - *DNA Copy Number Variations MH - Gene Rearrangement MH - Humans MH - In Situ Hybridization, Fluorescence MH - *Leukemia, Myeloid, Acute/diagnosis/genetics MH - Myeloid-Lymphoid Leukemia Protein/genetics MH - Risk Assessment PMC - PMC9187764 COIS- The authors declare no competing interests. EDAT- 2022/06/11 06:00 MHDA- 2022/06/15 06:00 PMCR- 2022/06/10 CRDT- 2022/06/10 23:18 PHST- 2022/03/17 00:00 [received] PHST- 2022/05/25 00:00 [accepted] PHST- 2022/06/10 23:18 [entrez] PHST- 2022/06/11 06:00 [pubmed] PHST- 2022/06/15 06:00 [medline] PHST- 2022/06/10 00:00 [pmc-release] AID - 10.1038/s41598-022-13545-y [pii] AID - 13545 [pii] AID - 10.1038/s41598-022-13545-y [doi] PST - epublish SO - Sci Rep. 2022 Jun 10;12(1):9585. doi: 10.1038/s41598-022-13545-y.