PMID- 36162409 OWN - NLM STAT- MEDLINE DCOM- 20221109 LR - 20221222 IS - 1361-6560 (Electronic) IS - 0031-9155 (Linking) VI - 67 IP - 22 DP - 2022 Nov 7 TI - Quantification of pulmonary functional MRI: state-of-the-art and emerging image processing methods and measurements. LID - 10.1088/1361-6560/ac9510 [doi] AB - Pulmonary functional magnetic resonance imaging (PfMRI) provides a way to non-invasively map and measure the spatial distribution of pulmonary ventilation, perfusion and gas-exchange abnormalities with unprecedented detail of functional processes at the level of airways, alveoli and the alveolar-capillary membrane. Current PfMRI approaches are dominated by hyperpolarized helium-3 ((3)He) and xenon-129 ((129)Xe) gases, which both provide rapid (8-15 s) and well-tolerated imaging examinations in patients with severe pulmonary diseases and pediatric populations, whilst employing no ionizing radiation. While a number of review papers summarize the required image acquisition hardware and software requirements needed to enable PfMRI, here we focus on the image analysis and processing methods required for reproducible measurements using hyperpolarized gas ventilation MRI. We start with the transition in the literature from qualitative and subjective scoring systems to quantitative and objective measurements which enable precise quantification of the lung's critical structure-function relationship. We provide an overview of quantitative biomarkers and the relevant respiratory system parameters that may be measured using PfMRI methods, outlining the history of developments in the field, current methods and then knowledge gaps and typical limitations. We focus on hyperpolarized noble gas MR image processing methods used for quantifying ventilation and gas distribution in the lungs, and discuss the utility and applications of imaging biomarkers generated through these techniques. We conclude with a summary of the current and future directions to further the development of image processing methods, and discuss the remaining challenges for potential clinical translation of these approaches and their integration into standard clinical workflows. CI - Creative Commons Attribution license. FAU - Sharma, Maksym AU - Sharma M AD - Robarts Research Institute, Western University, London, Canada. AD - Department of Medical Biophysics, Western University, London, Canada. FAU - Wyszkiewicz, Paulina V AU - Wyszkiewicz PV AD - Robarts Research Institute, Western University, London, Canada. AD - Department of Medical Biophysics, Western University, London, Canada. FAU - Desaigoudar, Vedanth AU - Desaigoudar V AD - Department of Medical Biophysics, Western University, London, Canada. FAU - Guo, Fumin AU - Guo F AD - Sunnybrook Research Institute, University of Toronto, Toronto, Canada. FAU - Capaldi, Dante Pi AU - Capaldi DP AD - Department of Radiation Oncology, Division of Physics, University of California San Francisco (UCSF), San Francisco, CA, United States of America. FAU - Parraga, Grace AU - Parraga G AUID- ORCID: 0000-0002-5619-4145 AD - Robarts Research Institute, Western University, London, Canada. AD - Department of Medical Biophysics, Western University, London, Canada. AD - Division of Respirology, Department of Medicine, Western University, London, Canada. AD - School of Biomedical Engineering, Western University, London, Canada. LA - eng GR - CIHR/Canada PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Review DEP - 20221107 PL - England TA - Phys Med Biol JT - Physics in medicine and biology JID - 0401220 RN - 206GF3GB41 (Helium) SB - IM MH - Child MH - Humans MH - *Helium MH - *Magnetic Resonance Imaging/methods MH - Lung/diagnostic imaging MH - Image Processing, Computer-Assisted MH - Pulmonary Ventilation OTO - NOTNLM OT - COPD OT - hyperpolarized gas MRI OT - machine learning OT - pulmonary functional MR image processing OT - registration OT - segmentation OT - ventilation EDAT- 2022/09/27 06:00 MHDA- 2022/11/10 06:00 CRDT- 2022/09/26 19:08 PHST- 2022/04/26 00:00 [received] PHST- 2022/09/26 00:00 [accepted] PHST- 2022/09/27 06:00 [pubmed] PHST- 2022/11/10 06:00 [medline] PHST- 2022/09/26 19:08 [entrez] AID - 10.1088/1361-6560/ac9510 [doi] PST - epublish SO - Phys Med Biol. 2022 Nov 7;67(22). doi: 10.1088/1361-6560/ac9510.