PMID- 37057673 OWN - NLM STAT- MEDLINE DCOM- 20230724 LR - 20240320 IS - 1530-0366 (Electronic) IS - 1098-3600 (Linking) VI - 25 IP - 7 DP - 2023 Jul TI - De novo missense variants in RRAGC lead to a fatal mTORopathy of early childhood. PG - 100838 LID - S1098-3600(23)00851-1 [pii] LID - 10.1016/j.gim.2023.100838 [doi] AB - PURPOSE: Mechanistic target of rapamycin (mTOR) complex 1 (mTORC1) regulates cell growth in response to nutritional status. Central to the mTORC1 function is the Rag-GTPase heterodimer. One component of the Rag heterodimer is RagC (Ras-related GTP-binding protein C), which is encoded by the RRAGC gene. METHODS: Genetic testing via trio exome sequencing was applied to identify the underlying disease cause in 3 infants with dilated cardiomyopathy, hepatopathy, and brain abnormalities, including pachygyria, polymicrogyria, and septo-optic dysplasia. Studies in patient-derived skin fibroblasts and in a HEK293 cell model were performed to investigate the cellular consequences. RESULTS: We identified 3 de novo missense variants in RRAGC (NM_022157.4: c.269C>A, p.(Thr90Asn), c.353C>T, p.(Pro118Leu), and c.343T>C, p.(Trp115Arg)), which were previously reported as occurring somatically in follicular lymphoma. Studies of patient-derived fibroblasts carrying the p.(Thr90Asn) variant revealed increased cell size, as well as dysregulation of mTOR-related p70S6K (ribosomal protein S6 kinase 1) and transcription factor EB signaling. Moreover, subcellular localization of mTOR was decoupled from metabolic state. We confirmed the key findings for all RRAGC variants described in this study in a HEK293 cell model. CONCLUSION: The above results are in line with a constitutive overactivation of the mTORC1 pathway. Our study establishes de novo missense variants in RRAGC as cause of an early-onset mTORopathy with unfavorable prognosis. CI - Copyright (c) 2023 The Authors. Published by Elsevier Inc. All rights reserved. FAU - Reijnders, Margot R F AU - Reijnders MRF AD - Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands. FAU - Seibt, Annette AU - Seibt A AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Brugger, Melanie AU - Brugger M AD - Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany. FAU - Lamers, Ideke J C AU - Lamers IJC AD - Department of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands. FAU - Ott, Torsten AU - Ott T AD - University Children's Hospital, University Hospital Muenster, Munster, Germany. FAU - Klaas, Oliver AU - Klaas O AD - Institute for Human Genetics, University Hospital Muenster, Muenster, Germany. FAU - Horvath, Judit AU - Horvath J AD - Institute for Human Genetics, University Hospital Muenster, Muenster, Germany. FAU - Rose, Ailsa M S AU - Rose AMS AD - Leeds Institute of Medical Research, University of Leeds, Leeds, United Kingdom. FAU - Craghill, Isabel M AU - Craghill IM AD - Leeds Institute of Medical Research, University of Leeds, Leeds, United Kingdom. FAU - Brunet, Theresa AU - Brunet T AD - Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany; Department of Paediatric Neurology and Developmental Medicine, Hauner Children's Hospital, Ludwig Maximilian University of Munich, Munich, Germany. FAU - Graf, Elisabeth AU - Graf E AD - Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany. FAU - Mayerhanser, Katharina AU - Mayerhanser K AD - Institute of Human Genetics, Klinikum rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany. FAU - Hellebrekers, Debby AU - Hellebrekers D AD - Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands. FAU - Pauck, David AU - Pauck D AD - Institute of Neuropathology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Neuen-Jacob, Eva AU - Neuen-Jacob E AD - Institute of Neuropathology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Rodenburg, Richard J T AU - Rodenburg RJT AD - Translational Metabolic Laboratory, Department of Pediatrics, Radboud University Medical Center, Nijmegen, The Netherlands. FAU - Wieczorek, Dagmar AU - Wieczorek D AD - Institute of Human Genetics, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Klee, Dirk AU - Klee D AD - Department of Diagnostic and Interventional Radiology, University Hospital, Dusseldorf, Germany. FAU - Mayatepek, Ertan AU - Mayatepek E AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Driessen, Gertjan AU - Driessen G AD - Department of Paediatrics, Maastricht University Medical Center, Maastricht, The Netherlands. FAU - Bindermann, Robert AU - Bindermann R AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Averdunk, Luisa AU - Averdunk L AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Lohmeier, Klaus AU - Lohmeier K AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. FAU - Sinnema, Margje AU - Sinnema M AD - Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands. FAU - Stegmann, Alexander P A AU - Stegmann APA AD - Department of Clinical Genetics, Maastricht University Medical Center, Maastricht, The Netherlands. FAU - Roepman, Ronald AU - Roepman R AD - Department of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands. FAU - Poulter, James A AU - Poulter JA AD - Leeds Institute of Medical Research, University of Leeds, Leeds, United Kingdom. FAU - Distelmaier, Felix AU - Distelmaier F AD - Department of General Pediatrics, Neonatology and Pediatric Cardiology, Medical Faculty, Heinrich-Heine-University, Dusseldorf, Germany. Electronic address: felix.distelmaier@med.uni-duesseldorf.de. LA - eng GR - MR/T02044X/1/MRC_/Medical Research Council/United Kingdom PT - Journal Article DEP - 20230411 PL - United States TA - Genet Med JT - Genetics in medicine : official journal of the American College of Medical Genetics JID - 9815831 RN - EC 2.7.11.1 (Mechanistic Target of Rapamycin Complex 1) RN - EC 3.6.5.2 (Monomeric GTP-Binding Proteins) RN - 0 (Multiprotein Complexes) RN - 0 (RRAGC protein, human) RN - EC 2.7.11.1 (TOR Serine-Threonine Kinases) SB - IM MH - Humans MH - Infant MH - Fibroblasts/metabolism MH - Genetic Diseases, Inborn/genetics MH - HEK293 Cells MH - *Mechanistic Target of Rapamycin Complex 1/genetics MH - *Monomeric GTP-Binding Proteins/genetics/metabolism MH - Multiprotein Complexes/genetics MH - Mutation, Missense MH - *TOR Serine-Threonine Kinases/genetics/metabolism OTO - NOTNLM OT - Cardiomyopathy OT - Cortical malformation OT - Heart OT - Lysosome OT - Mitochondrial OT - mTORopathy COIS- Conflict of Interest The authors declare no conflicts of interest. EDAT- 2023/04/15 06:00 MHDA- 2023/07/10 06:42 CRDT- 2023/04/14 05:58 PHST- 2022/11/17 00:00 [received] PHST- 2023/03/29 00:00 [revised] PHST- 2023/04/03 00:00 [accepted] PHST- 2023/07/10 06:42 [medline] PHST- 2023/04/15 06:00 [pubmed] PHST- 2023/04/14 05:58 [entrez] AID - S1098-3600(23)00851-1 [pii] AID - 10.1016/j.gim.2023.100838 [doi] PST - ppublish SO - Genet Med. 2023 Jul;25(7):100838. doi: 10.1016/j.gim.2023.100838. Epub 2023 Apr 11.