PMID- 37096798 OWN - NLM STAT- MEDLINE DCOM- 20230817 LR - 20230817 IS - 1097-0290 (Electronic) IS - 0006-3592 (Linking) VI - 120 IP - 9 DP - 2023 Sep TI - Addressing amino acid-derived inhibitory metabolites and enhancing CHO cell culture performance through DOE-guided media modifications. PG - 2542-2558 LID - 10.1002/bit.28403 [doi] AB - Previously, we identified six inhibitory metabolites (IMs) accumulating in Chinese hamster ovary (CHO) cultures using AMBIC 1.0 community reference medium that negatively impacted culture performance. The goal of the current study was to modify the medium to control IM accumulation through design of experiments (DOE). Initial over-supplementation of precursor amino acids (AAs) by 100% to 200% in the culture medium revealed positive correlations between initial AA concentrations and IM levels. A screening design identified 5 AA targets, Lys, Ile, Trp, Leu, Arg, as key contributors to IMs. Response surface design analysis was used to reduce initial AA levels between 13% and 33%, and these were then evaluated in batch and fed-batch cultures. Lowering AAs in basal and feed medium and reducing feed rate from 10% to 5% reduced inhibitory metabolites HICA and NAP by up to 50%, MSA by 30%, and CMP by 15%. These reductions were accompanied by a 13% to 40% improvement in peak viable cell densities and 7% to 50% enhancement in IgG production in batch and fed-batch processes, respectively. This study demonstrates the value of tuning specific AA levels in reference basal and feed media using statistical design methodologies to lower problematic IMs. CI - (c) 2023 The Authors. Biotechnology and Bioengineering published by Wiley Periodicals LLC. FAU - Ladiwala, Pranay AU - Ladiwala P AUID- ORCID: 0000-0002-6231-254X AD - Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland, USA. FAU - Dhara, Venkata Gayatri AU - Dhara VG AD - Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland, USA. FAU - Jenkins, Jackson AU - Jenkins J AD - Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland, USA. FAU - Kuang, Bingyu AU - Kuang B AD - Department of Chemical Engineering, University of Massachusetts Lowell, Lowell, Massachusetts, USA. FAU - Hoang, Duc AU - Hoang D AUID- ORCID: 0000-0002-7496-5193 AD - Department of Chemical Engineering, University of Massachusetts Lowell, Lowell, Massachusetts, USA. FAU - Yoon, Seongkyu AU - Yoon S AUID- ORCID: 0000-0002-5330-8784 AD - Department of Chemical Engineering, University of Massachusetts Lowell, Lowell, Massachusetts, USA. FAU - Betenbaugh, Michael J AU - Betenbaugh MJ AUID- ORCID: 0000-0002-6336-4659 AD - Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland, USA. LA - eng PT - Journal Article PT - Research Support, U.S. Gov't, Non-P.H.S. DEP - 20230425 PL - United States TA - Biotechnol Bioeng JT - Biotechnology and bioengineering JID - 7502021 RN - 0 (Amino Acids) RN - 0 (Culture Media) SB - IM MH - Cricetinae MH - Animals MH - Cricetulus MH - *Amino Acids/metabolism MH - CHO Cells MH - Culture Media/chemistry MH - *Batch Cell Culture Techniques/methods OTO - NOTNLM OT - Chinese hamster ovary OT - amino acid metabolism OT - design of experiments OT - fed-batch bioprocessing OT - inhibitory metabolites OT - medium optimization EDAT- 2023/04/25 17:42 MHDA- 2023/08/17 06:43 CRDT- 2023/04/25 07:02 PHST- 2023/03/22 00:00 [revised] PHST- 2022/12/18 00:00 [received] PHST- 2023/04/10 00:00 [accepted] PHST- 2023/08/17 06:43 [medline] PHST- 2023/04/25 17:42 [pubmed] PHST- 2023/04/25 07:02 [entrez] AID - 10.1002/bit.28403 [doi] PST - ppublish SO - Biotechnol Bioeng. 2023 Sep;120(9):2542-2558. doi: 10.1002/bit.28403. Epub 2023 Apr 25.