PMID- 37478796 OWN - NLM STAT- MEDLINE DCOM- 20230814 LR - 20230823 IS - 2210-7762 (Print) VI - 276-277 DP - 2023 Aug TI - Cryptic KMT2A/MLLT10 fusion detected by next-generation sequencing in a case of pediatric acute megakaryoblastic leukemia. PG - 36-39 LID - S2210-7762(23)00038-8 [pii] LID - 10.1016/j.cancergen.2023.07.003 [doi] AB - KMT2A (11q23.3) gene rearrangements are found in acute leukemia and are associated with a poor or intermediate prognosis. MLLT10 is the fourth most common gene fusion partner for KMT2A. A reciprocal translocation t(10;11) is insufficient to produce an in-frame KMT2A/MLLT10 fusion, because the genes involved in the rearrangement have opposite transcriptional orientations. In order to bring KMT2A and MLLT10 into juxtaposition, complex rearrangements are required. Until now, conventional chromosome, fluorescence in situ hybridization (FISH), and reverse transcriptase-polymerase chain reaction (RT-PCR) studies have been used to detect KMT2A/MLLT10 fusions. However, conventional studies have limitations, such as poor and inconsistent resolution, when compared to next-generation sequencing (NGS). In this study, we report a pediatric patient with acute megakaryoblastic leukemia, in whom the cryptic KMT2A/MLLT10 fusion was not detected by KMT2A break-apart probe FISH and chromosome analysis, but detected by NGS. In this patient, NGS showed cryptic insertion of MLLT10 exons 9-24 into intron 9 of KMT2A, resulting in a KMT2A/MLLT10 fusion. Therefore, NGS is a valuable complementary option for the evaluation of structural aberrations, especially those with a cryptic size. CI - Copyright (c) 2023. Published by Elsevier Inc. FAU - Kim, Yeseul AU - Kim Y AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea. FAU - Kim, Boram AU - Kim B AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea. FAU - Seong, Moon-Woo AU - Seong MW AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea; Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea; Seoul National University Cancer Research Institute, Seoul, Republic of Korea. FAU - Lee, Dong Soon AU - Lee DS AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea; Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea; Seoul National University Cancer Research Institute, Seoul, Republic of Korea. FAU - Hong, Kyung Taek AU - Hong KT AD - Seoul National University Cancer Research Institute, Seoul, Republic of Korea; Department of Pediatrics, Seoul National University Children's Hospital, Seoul, Republic of Korea; Department of Pediatrics, Seoul National University College of Medicine, Seoul, Republic of Korea. FAU - Kang, Hyoung Jin AU - Kang HJ AD - Seoul National University Cancer Research Institute, Seoul, Republic of Korea; Department of Pediatrics, Seoul National University Children's Hospital, Seoul, Republic of Korea; Department of Pediatrics, Seoul National University College of Medicine, Seoul, Republic of Korea. FAU - Yun, Jiwon AU - Yun J AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea; Department of Laboratory Medicine, Chung-Ang University Hospital, 102, Heukseok-ro, Dongjak-gu, Seoul 06973, Republic of Korea. Electronic address: drjwyun@cauhs.or.kr. FAU - Chang, Yoon Hwan AU - Chang YH AD - Department of Laboratory Medicine, Seoul National University Hospital, 101, Daehak-ro, Jongno-gu, Seoul 03080, Republic of Korea; Department of Laboratory Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea. Electronic address: cyh1969@snu.ac.kr. LA - eng PT - Case Reports PT - Journal Article DEP - 20230711 PL - United States TA - Cancer Genet JT - Cancer genetics JID - 101539150 RN - 0 (Transcription Factors) RN - 149025-06-9 (Myeloid-Lymphoid Leukemia Protein) RN - 0 (Oncogene Proteins, Fusion) RN - 0 (MLLT10 protein, human) SB - IM MH - Child MH - Humans MH - *Leukemia, Megakaryoblastic, Acute/genetics MH - In Situ Hybridization, Fluorescence MH - Transcription Factors/genetics MH - Myeloid-Lymphoid Leukemia Protein/genetics MH - *Leukemia, Myeloid, Acute/genetics MH - Translocation, Genetic MH - High-Throughput Nucleotide Sequencing MH - Oncogene Proteins, Fusion/genetics OTO - NOTNLM OT - Acute megakaryoblastic leukemia OT - KMT2A/MLLT10 fusion OT - Next-generation sequencing OT - Pediatric AML COIS- Declaration of Competing Interest The authors declare no competing interests. EDAT- 2023/07/22 10:42 MHDA- 2023/08/14 06:41 CRDT- 2023/07/21 18:10 PHST- 2022/12/31 00:00 [received] PHST- 2023/06/09 00:00 [revised] PHST- 2023/07/08 00:00 [accepted] PHST- 2023/08/14 06:41 [medline] PHST- 2023/07/22 10:42 [pubmed] PHST- 2023/07/21 18:10 [entrez] AID - S2210-7762(23)00038-8 [pii] AID - 10.1016/j.cancergen.2023.07.003 [doi] PST - ppublish SO - Cancer Genet. 2023 Aug;276-277:36-39. doi: 10.1016/j.cancergen.2023.07.003. Epub 2023 Jul 11.