PMID- 37589022
OWN - NLM
STAT- PubMed-not-MEDLINE
LR  - 20230928
IS  - 2730-5848 (Electronic)
IS  - 2730-583X (Print)
IS  - 2730-583X (Linking)
VI  - 3
IP  - 4
DP  - 2023 Aug
TI  - DBLiPro: A Database for Lipids and Proteins in Human Lipid Metabolism.
PG  - 350-359
LID - 10.1007/s43657-023-00099-w [doi]
AB  - To help researchers in the field of biology, medicine, chemistry, and materials 
      science to use lipidomic data conveniently, there is an urgent need to develop a 
      platform that provides a systematic knowledgebase of human lipid metabolism and 
      lipidome-centric omics analysis tools. DBLiPro is a user-friendly webserver 
      allowing for access to human metabolism-related lipids and proteins knowledge 
      database and an interactive bioinformatics integrative analysis workflow for 
      lipidomics, transcriptomics, and proteomics data. In DBLiPro, there are 3109 
      lipid-associated proteins (LAPs) and 2098 lipid metabolites in the knowledge base 
      section, which were obtained from Uniprot, Kyoto Encyclopedia of Genes and 
      Genomes (KEGG) and were further annotated by information from other public 
      resources in the knowledge base section, such as RaftProt and PubChem. DBLiPro 
      offers a step-by-step interactive analysis workflow for lipidomics, 
      transcriptomics, proteomics, and their integrating multi-omics analysis focusing 
      on the human lipid metabolism. In summary, DBLiPro is capable of helping users 
      discover key molecules (lipids and proteins) in human lipid metabolism and 
      investigate lipid-protein functions underlying mechanisms based on their own 
      omics data. The DBLiPro is freely available at http://lipid.cloudna.cn/home.
CI  - (c) International Human Phenome Institutes (Shanghai) 2023. Springer Nature or its 
      licensor (e.g. a society or other partner) holds exclusive rights to this article 
      under a publishing agreement with the author(s) or other rightsholder(s); author 
      self-archiving of the accepted manuscript version of this article is solely 
      governed by the terms of such publishing agreement and applicable law.
FAU - Wu, Qian
AU  - Wu Q
AUID- ORCID: 0000-0002-1164-6582
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Huang, Yuanyuan
AU  - Huang Y
AUID- ORCID: 0000-0002-6732-2835
AD  - Beijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 
      China.
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Kong, Xiangya
AU  - Kong X
AUID- ORCID: 0000-0001-9230-878X
AD  - Beijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 
      China.
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Jia, Ben
AU  - Jia B
AUID- ORCID: 0000-0001-5859-8242
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Lu, Xiaoting
AU  - Lu X
AUID- ORCID: 0000-0002-4720-8461
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Chen, Yunqin
AU  - Chen Y
AUID- ORCID: 0000-0002-8619-0890
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Huang, Zechi
AU  - Huang Z
AUID- ORCID: 0000-0001-5454-5733
AD  - Beijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 
      China.
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Li, Yuan-Yuan
AU  - Li YY
AUID- ORCID: 0000-0001-8755-4695
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
FAU - Dai, Wentao
AU  - Dai W
AUID- ORCID: 0000-0002-0762-919X
AD  - NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of 
      Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical 
      Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 
      200237 China. GRID: grid.8547.e. ISNI: 0000 0001 0125 2443
AD  - Shanghai Key Laboratory of Gastric Neoplasms, Department of General Surgery, 
      Shanghai Institute of Digestive Surgery, Ruijin Hospital, Shanghai Jiao Tong 
      University School of Medicine, Shanghai, 200025 China. GRID: grid.412277.5. ISNI: 
      0000 0004 1760 6738
AD  - Shanghai Engineering Research Center of Pharmaceutical Translation, Shanghai, 
      201203 China.
LA  - eng
PT  - Journal Article
DEP - 20230516
PL  - Switzerland
TA  - Phenomics
JT  - Phenomics (Cham, Switzerland)
JID - 9918351171706676
PMC - PMC10425311
OTO - NOTNLM
OT  - Database
OT  - Human lipid metabolism
OT  - Lipid
OT  - Lipid-associated proteins
OT  - Omics
COIS- Conflict of InterestAll of authors declare no competing interests.
EDAT- 2023/08/17 06:43
MHDA- 2023/08/17 06:44
PMCR- 2024/08/01
CRDT- 2023/08/17 04:30
PHST- 2022/08/20 00:00 [received]
PHST- 2023/02/09 00:00 [revised]
PHST- 2023/02/14 00:00 [accepted]
PHST- 2024/08/01 00:00 [pmc-release]
PHST- 2023/08/17 06:44 [medline]
PHST- 2023/08/17 06:43 [pubmed]
PHST- 2023/08/17 04:30 [entrez]
AID - 99 [pii]
AID - 10.1007/s43657-023-00099-w [doi]
PST - epublish
SO  - Phenomics. 2023 May 16;3(4):350-359. doi: 10.1007/s43657-023-00099-w. eCollection 
      2023 Aug.