PMID- 38148168 OWN - NLM STAT- Publisher LR - 20240209 IS - 1559-6095 (Electronic) IS - 1559-6095 (Linking) DP - 2024 Feb 9 TI - Whole-Brain Calcium Imaging in Drosophila during Sleep and Wake. LID - 10.1101/pdb.prot108419 [doi] AB - Genetically encoded calcium indicators (GECIs) allow for the noninvasive evaluation of neuronal activity in vivo, and imaging GECIs in Drosophila has become commonplace for understanding neural functions and connectivity in this system. GECIs can also be used as read-outs for studying sleep in this model organism. Here, we describe a methodology for tracking the activity of neurons in the fly brain using a two-photon (2p) microscopy system. This method can be adapted to perform functional studies of neural activity in Drosophila under both spontaneous and evoked conditions, as well as during spontaneous or induced sleep. We first describe a tethering and surgical procedure that allows survival under the microscopy conditions required for long-term recordings. We then outline the steps and reagents required for optogenetic activation of sleep-promoting neurons while simultaneously recording neural activity from the fly brain. We also describe the procedure for recording from two different locations-namely, the top of the head (e.g., to record mushroom body calyx activity) or the back of the head (e.g., to record central complex activity). We also provide different strategies for recording from GECIs confined to the cell body versus the entire neuron. Finally, we describe the steps required for analyzing the multidimensional data that can be acquired. In all, this protocol shows how to perform calcium imaging experiments in tethered flies, with a focus on acquiring spontaneous and induced sleep data. CI - (c) 2023 Cold Spring Harbor Laboratory Press. FAU - Tainton-Heap, Lucy AU - Tainton-Heap L AD - Queensland Brain Institute, The University of Queensland, Brisbane, Queensland 4072, Australia. FAU - Troup, Michael AU - Troup M AD - Queensland Brain Institute, The University of Queensland, Brisbane, Queensland 4072, Australia. FAU - Van De Poll, Matthew AU - Van De Poll M AD - Queensland Brain Institute, The University of Queensland, Brisbane, Queensland 4072, Australia. FAU - van Swinderen, Bruno AU - van Swinderen B AD - Queensland Brain Institute, The University of Queensland, Brisbane, Queensland 4072, Australia b.vanswinderen@uq.edu.au. LA - eng PT - Journal Article DEP - 20240209 PL - United States TA - Cold Spring Harb Protoc JT - Cold Spring Harbor protocols JID - 101524530 SB - IM EDAT- 2023/12/27 00:41 MHDA- 2023/12/27 00:41 CRDT- 2023/12/26 21:23 PHST- 2023/12/27 00:41 [pubmed] PHST- 2023/12/27 00:41 [medline] PHST- 2023/12/26 21:23 [entrez] AID - pdb.prot108419 [pii] AID - 10.1101/pdb.prot108419 [doi] PST - aheadofprint SO - Cold Spring Harb Protoc. 2024 Feb 9. doi: 10.1101/pdb.prot108419.