PMID- 6400830 OWN - NLM STAT- MEDLINE DCOM- 19900314 LR - 20131121 IS - 0739-1102 (Print) IS - 0739-1102 (Linking) VI - 1 IP - 6 DP - 1984 Jun TI - Denaturation of nucleic acids induced by intercalating agents. Biochemical and biophysical properties of acridine orange-DNA complexes. PG - 1485-99 AB - At high binding densities acridine orange (AO) forms complexes with ds DNA which are insoluble in aqueous media. These complexes are characterized by high red- and minimal green-luminescence, 1:1 (dye/P) stoichiometry and resemble complexes of AO with ss nucleic acids. Formation of these complexes can be conveniently monitored by light scatter measurements. Light scattering properties of these complexes are believed to result from the condensation of nucleic acids induced by the cationic, intercalating ligands. The spectral and thermodynamic data provide evidence that AO (and other intercalating agents) induces denaturation of ds nucleic acids; the driving force of the denaturation is high affinity and cooperativity of binding of these ligands to ss nucleic acids. The denaturing effects of AO, adriamycin and ellipticine were confirmed by biochemical studies on accessibility of DNA bases (in complexes with these ligands) to the external probes. The denaturing properties of AO vary depending on the primary structure (sugar- and base-composition) of nucleic acids. FAU - Kapuscinski, J AU - Kapuscinski J AD - Memorial Sloan-Kettering Cancer Center, Walker Laboratory, Rye, New York 10580. FAU - Darzynkiewicz, Z AU - Darzynkiewicz Z LA - eng GR - CA23296/CA/NCI NIH HHS/United States GR - CA28704/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, U.S. Gov't, P.H.S. PL - England TA - J Biomol Struct Dyn JT - Journal of biomolecular structure & dynamics JID - 8404176 RN - 0 (Intercalating Agents) RN - 9007-49-2 (DNA) RN - F30N4O6XVV (Acridine Orange) SB - IM MH - *Acridine Orange MH - Binding Sites MH - *DNA MH - Intercalating Agents MH - Light MH - Nucleic Acid Denaturation MH - Scattering, Radiation EDAT- 1984/06/01 00:00 MHDA- 1984/06/01 00:01 CRDT- 1984/06/01 00:00 PHST- 1984/06/01 00:00 [pubmed] PHST- 1984/06/01 00:01 [medline] PHST- 1984/06/01 00:00 [entrez] AID - 10.1080/07391102.1984.10507532 [doi] PST - ppublish SO - J Biomol Struct Dyn. 1984 Jun;1(6):1485-99. doi: 10.1080/07391102.1984.10507532.