PMID- 7711015 OWN - NLM STAT- MEDLINE DCOM- 19950517 LR - 20231213 IS - 0006-2960 (Print) IS - 0006-2960 (Linking) VI - 34 IP - 15 DP - 1995 Apr 18 TI - X-ray crystal structure of the soybean agglutinin cross-linked with a biantennary analog of the blood group I carbohydrate antigen. PG - 4933-42 AB - Soybean agglutinin (SBA) (Glycine max), which is a tetrameric GalNAc/Gal-specific lectin, has recently been reported to form unique, highly organized cross-linked complexes with a series of naturally occurring and synthetic multiantennary carbohydrates with terminal GalNAc or Gal residues [Gupta, D., Bhattacharyya, L., Fant, J., Macaluso, F., Sabesan, S., & Brewer, C. F. (1994) Biochemistry 33, 7495-7504]. In order to elucidate the nature of these complexes, the X-ray crystallographic structure of SBA cross-linked with a biantennary analog of the blood group I carbohydrate antigen is reported. The structure reveals that lattice formation is promoted uniquely by the bridging action of the bivalent pentasaccharide (beta-LacNAc)2Gal-beta-R, where R is -O(CH2)5COOCH3 and the beta-LacNAc moieties are linked to the 2 and 6 positions of the core Gal. The structure of SBA complexed with the synthetic biantennary pentasaccharide has thus been determined by molecular replacement techniques and refined at 2.6 A resolution to an R value of 20.1%. The crystals are hexagonal with a P6(4)22 space group, which differs significantly from that of crystals of the free protein. In the structure, each monomeric asymmetric unit contains a Man9 oligomannose-type chain at Asn 75, with only the first two GlcNAc residues visible. The overall tertiary structure of the SBA subunit is similar to that of other legume lectins as well as certain animal lectins. However, the dimer interface in the SBA tetramer is unusual in that only one complete peptide chain is sterically permitted, thus requiring juxtapositioning of one C-terminal fragmented subunit together with an intact subunit. Association between SBA tetramers involves binding of the terminal Gal residues of the pentasaccharide at identical sites in each monomer, with the sugar cross-linking to a symmetry-related neighbor molecule. The cross-linking pentasaccharide is in a conformation that possesses a pseudo-2-fold axis of symmetry which lies on a crystallographic 2-fold axis of symmetry of the lattice. Hence, the symmetry properties of the bivalent oligosaccharide as well as the lectin are structural determinants of the lattice. The results are discussed in terms of multidimensional carbohydrate-lectin cross-linked complexes, as well as the signal transduction properties of multivalent lectins. FAU - Dessen, A AU - Dessen A AD - Department of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA. FAU - Gupta, D AU - Gupta D FAU - Sabesan, S AU - Sabesan S FAU - Brewer, C F AU - Brewer CF FAU - Sacchettini, J C AU - Sacchettini JC LA - eng GR - CA-16054/CA/NCI NIH HHS/United States GR - GM-47637/GM/NIGMS NIH HHS/United States GR - P30 CA-13330/CA/NCI NIH HHS/United States PT - Journal Article PT - Research Support, Non-U.S. Gov't PT - Research Support, U.S. Gov't, P.H.S. PL - United States TA - Biochemistry JT - Biochemistry JID - 0370623 RN - 0 (I Blood-Group System) RN - 0 (Isoantigens) RN - 0 (Lectins) RN - 0 (Plant Lectins) RN - 0 (Soybean Proteins) RN - 0 (soybean lectin) SB - IM MH - Binding Sites MH - Carbohydrate Conformation MH - Carbohydrate Sequence MH - Crystallization MH - Crystallography, X-Ray MH - I Blood-Group System/*immunology MH - Isoantigens/*chemistry MH - Lectins/*chemistry MH - Models, Molecular MH - Molecular Sequence Data MH - Plant Lectins MH - Protein Binding MH - Protein Conformation MH - *Soybean Proteins MH - Glycine max EDAT- 1995/04/18 00:00 MHDA- 1995/04/18 00:01 CRDT- 1995/04/18 00:00 PHST- 1995/04/18 00:00 [pubmed] PHST- 1995/04/18 00:01 [medline] PHST- 1995/04/18 00:00 [entrez] AID - 10.1021/bi00015a004 [doi] PST - ppublish SO - Biochemistry. 1995 Apr 18;34(15):4933-42. doi: 10.1021/bi00015a004.