PMID- 7756992 OWN - NLM STAT- MEDLINE DCOM- 19950626 LR - 20181113 IS - 0961-8368 (Print) IS - 1469-896X (Electronic) IS - 0961-8368 (Linking) VI - 3 IP - 12 DP - 1994 Dec TI - Molecular evolution and domain structure of plasminogen-related growth factors (HGF/SF and HGF1/MSP). PG - 2378-94 AB - Plasminogen-related growth factors, a new family of polypeptide growth factors with the basic domain organization and mechanism of activation of the blood proteinase plasminogen, include hepatocyte growth factor/scatter factor (HGF/SF), a potent effector of the growth, movement, and differentiation of epithelia and endothelia, and hepatocyte growth factor-like/macrophage stimulating protein (HGF1/MSP), an effector of macrophage chemotaxis and phagocytosis. Phylogeny of the serine proteinase domains and analysis of intron-exon boundaries and kringle sequences indicate that HGF/SF, HGF1/MSP, plasminogen, and apolipoprotein (a) have evolved from a common ancestral gene that consisted of an N-terminal domain corresponding to plasminogen activation peptide (PAP), 3 copies of the kringle domain, and a serine proteinase domain. Models of the N domains of HGF/SF, HGF1/MSP, and plasminogen, characterized by the presence of 4 conserved Cys residues forming a loop in a loop, have been modeled based on disulfide-bond constraints. There is a distinct pattern of charged and hydrophobic residues in the helix-strand-helix motif proposed for the PAP domain of HGF/SF; these may be important for receptor interaction. Three-dimensional structures of the 4 kringle and the serine proteinase domains of HGF/SF were constructed by comparative modeling using the suite of programs COMPOSER and were energy minimized. Docking of a lysine analogue indicates a putative lysine-binding pocket within kringle 2 (and possibly another in kringle 4). The models suggest a mechanism for the formation of a noncovalent HGF/SF homodimer that may be responsible for the activation of the Met receptor. These data provide evidence for the divergent evolution and structural similarity of plasminogen, HGF/SF, and HGF1/MSP, and highlight a new strategy for growth factor evolution, namely the adaptation of a proteolytic enzyme to a role in receptor activation. FAU - Donate, L E AU - Donate LE AD - Department of Crystallography, Birkbeck College, University of London, United Kingdom. FAU - Gherardi, E AU - Gherardi E FAU - Srinivasan, N AU - Srinivasan N FAU - Sowdhamini, R AU - Sowdhamini R FAU - Aparicio, S AU - Aparicio S FAU - Blundell, T L AU - Blundell TL LA - eng PT - Comparative Study PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - United States TA - Protein Sci JT - Protein science : a publication of the Protein Society JID - 9211750 RN - 0 (Apolipoproteins A) RN - 0 (Growth Substances) RN - 0 (Proto-Oncogene Proteins) RN - 0 (macrophage stimulating protein) RN - 67256-21-7 (Hepatocyte Growth Factor) RN - 9001-26-7 (Prothrombin) RN - 9001-30-3 (Factor XII) RN - 9001-91-6 (Plasminogen) RN - EC 2.7.10.1 (Proto-Oncogene Proteins c-met) RN - EC 2.7.10.1 (Receptor Protein-Tyrosine Kinases) RN - EC 3.4.21.- (Plasminogen Activators) RN - EC 3.4.21.- (Serine Endopeptidases) SB - IM MH - Amino Acid Sequence MH - Animals MH - Apolipoproteins A/chemistry/genetics MH - *Biological Evolution MH - Computer Simulation MH - Factor XII/chemistry/genetics MH - Genes MH - Growth Substances/*chemistry/genetics MH - Hepatocyte Growth Factor/*chemistry/genetics MH - *Kringles MH - Models, Molecular MH - Molecular Sequence Data MH - Multigene Family MH - Phylogeny MH - Plasminogen/*chemistry/genetics MH - Plasminogen Activators/chemistry/genetics MH - *Protein Structure, Tertiary MH - Prothrombin/chemistry/genetics MH - *Proto-Oncogene Proteins MH - Proto-Oncogene Proteins c-met MH - Receptor Protein-Tyrosine Kinases/chemistry MH - Sequence Alignment MH - Sequence Homology, Amino Acid MH - Serine Endopeptidases/chemistry/genetics PMC - PMC2142779 EDAT- 1994/12/01 00:00 MHDA- 1994/12/01 00:01 PMCR- 1995/06/01 CRDT- 1994/12/01 00:00 PHST- 1994/12/01 00:00 [pubmed] PHST- 1994/12/01 00:01 [medline] PHST- 1994/12/01 00:00 [entrez] PHST- 1995/06/01 00:00 [pmc-release] AID - 10.1002/pro.5560031222 [doi] PST - ppublish SO - Protein Sci. 1994 Dec;3(12):2378-94. doi: 10.1002/pro.5560031222.