PMID- 7840975 OWN - NLM STAT- MEDLINE DCOM- 19950309 LR - 20061115 IS - 0736-6205 (Print) IS - 0736-6205 (Linking) VI - 17 IP - 5 DP - 1994 Nov TI - High resolution mapping using fluorescence in situ hybridization to extended DNA fibers prepared from agarose-embedded cells. PG - 928-9, 932-3 AB - Fluorescence in situ hybridization (FISH) and pulse field gel electrophoresis (PFGE) are essential techniques in physical mapping and in positional cloning. We present a technique that utilizes agarose-embedded high molecular weight DNA prepared for PFGE as a target for FISH. The agarose blocks are melted, and the DNA is extended on a poly-L-lysine-coated microscope slide. The resulting DNA fibers appear on the slide as long straight strands and are a suitable target for high resolution FISH mapping as demonstrated here with cosmid and plasmid hybridizations. FAU - Heiskanen, M AU - Heiskanen M AD - University of Helsinki, Finland. FAU - Karhu, R AU - Karhu R FAU - Hellsten, E AU - Hellsten E FAU - Peltonen, L AU - Peltonen L FAU - Kallioniemi, O P AU - Kallioniemi OP FAU - Palotie, A AU - Palotie A LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - England TA - Biotechniques JT - BioTechniques JID - 8306785 RN - 25104-18-1 (Polylysine) RN - 9007-49-2 (DNA) RN - 9012-36-6 (Sepharose) SB - IM MH - Chromosome Mapping/*methods MH - Cosmids MH - DNA/*metabolism MH - Electrophoresis, Gel, Pulsed-Field MH - Humans MH - *In Situ Hybridization, Fluorescence MH - Lymphocytes/chemistry MH - Microscopy, Fluorescence MH - Plasmids MH - Polylysine MH - Restriction Mapping MH - *Sepharose EDAT- 1994/11/01 00:00 MHDA- 1994/11/01 00:01 CRDT- 1994/11/01 00:00 PHST- 1994/11/01 00:00 [pubmed] PHST- 1994/11/01 00:01 [medline] PHST- 1994/11/01 00:00 [entrez] PST - ppublish SO - Biotechniques. 1994 Nov;17(5):928-9, 932-3.