PMID- 9280343 OWN - NLM STAT- MEDLINE DCOM- 19971002 LR - 20191210 IS - 1356-9597 (Print) IS - 1356-9597 (Linking) VI - 2 IP - 5 DP - 1997 May TI - Identification of an extended half-site motif required for the function of peroxisome proliferator-activated receptor alpha. PG - 315-27 AB - BACKGROUND: Peroxisome proliferator-activated receptors (PPARs) belong to the nuclear hormone receptor superfamily and regulate many genes of the proteins involved in lipid metabolism, including peroxisomal acyl-CoA oxidase (AOX). Through heterodimerization with retinoid X receptors (RXRs), PPAR was believed to recognize the sequence elements consisting of two directly repeating 6-bp half-sites spaced by one nucleotide (DR-1), located in the regulatory regions of these genes. RESULTS: Employing the peroxisome proliferator-responsive enhancer of the rat AOX gene, we analysed the minimal sequence requirements for enhancer activity and PPARalpha/RXRalpha binding. We found that the sequence just downstream of the DR-1 motif is indispensable for both functions. By a direct selection procedure of high-affinity binding sites from a random sequence pool, we identified a consensus sequence at the four positions next to DR-1. We also suggest that PPARalpha binds to the downstream half-site, whereas RXRalpha binds to the upstream half-site of the AOX DR-1. CONCLUSIONS: An extended half-site of 10-bp, but not a simple 6-bp half-site, is required for the PPARalpha binding, upon heterodimer formation with RXRalpha. The binding polarity of PPARalpha/RXRalpha seems to be opposite to that of other RXR-involving heterodimers. FAU - Osada, S AU - Osada S AD - Department of Life Science, Himeji Institute of Technology, Kamigori, Hyogo, Japan. FAU - Tsukamoto, T AU - Tsukamoto T FAU - Takiguchi, M AU - Takiguchi M FAU - Mori, M AU - Mori M FAU - Osumi, T AU - Osumi T LA - eng PT - Journal Article PT - Research Support, Non-U.S. Gov't PL - England TA - Genes Cells JT - Genes to cells : devoted to molecular & cellular mechanisms JID - 9607379 RN - 0 (DNA-Binding Proteins) RN - 0 (Nuclear Proteins) RN - 0 (Receptors, Cytoplasmic and Nuclear) RN - 0 (Receptors, Retinoic Acid) RN - 0 (Retinoid X Receptors) RN - 0 (Transcription Factors) RN - EC 1.- (Oxidoreductases) RN - EC 1.13.12.- (Luciferases) RN - EC 1.3.3.- (peroxisomal acyl-CoA oxidase) RN - EC 1.3.3.6 (Acyl-CoA Oxidase) SB - IM MH - Acyl-CoA Oxidase MH - Animals MH - Binding Sites/genetics MH - Cell Line MH - Consensus Sequence/genetics MH - DNA-Binding Proteins/*metabolism MH - Electrophoresis, Polyacrylamide Gel MH - Enhancer Elements, Genetic/genetics MH - Genes, Reporter/genetics MH - Luciferases/metabolism MH - Nuclear Proteins/*metabolism MH - Oxidoreductases/*genetics MH - Plasmids/genetics MH - Point Mutation MH - Rats MH - Receptors, Cytoplasmic and Nuclear/*metabolism MH - Receptors, Retinoic Acid/*metabolism MH - Retinoid X Receptors MH - Sequence Alignment MH - Sequence Deletion MH - Transcription Factors/*metabolism MH - Transfection EDAT- 1997/05/01 00:00 MHDA- 1997/05/01 00:01 CRDT- 1997/05/01 00:00 PHST- 1997/05/01 00:00 [pubmed] PHST- 1997/05/01 00:01 [medline] PHST- 1997/05/01 00:00 [entrez] AID - 10.1046/j.1365-2443.1997.1220319.x [doi] PST - ppublish SO - Genes Cells. 1997 May;2(5):315-27. doi: 10.1046/j.1365-2443.1997.1220319.x.