PMID- 20453058 OWN - NLM STAT- MEDLINE DCOM- 20101220 LR - 20220316 IS - 1557-3265 (Electronic) IS - 1078-0432 (Linking) VI - 16 IP - 14 DP - 2010 Jul 15 TI - Predictive biomarkers of sensitivity to the phosphatidylinositol 3' kinase inhibitor GDC-0941 in breast cancer preclinical models. PG - 3670-83 LID - 10.1158/1078-0432.CCR-09-2828 [doi] AB - PURPOSE: The class I phosphatidylinositol 3' kinase (PI3K) plays a major role in proliferation and survival in a wide variety of human cancers. A key factor in successful development of drugs targeting this pathway is likely to be the identification of responsive patient populations with predictive diagnostic biomarkers. This study sought to identify candidate biomarkers of response to the selective PI3K inhibitor GDC-0941. EXPERIMENTAL DESIGN: We used a large panel of breast cancer cell lines and in vivo xenograft models to identify candidate predictive biomarkers for a selective inhibitor of class I PI3K that is currently in clinical development. The approach involved pharmacogenomic profiling as well as analysis of gene expression data sets from cells profiled at baseline or after GDC-0941 treatment. RESULTS: We found that models harboring mutations in PIK3CA, amplification of human epidermal growth factor receptor 2, or dual alterations in two pathway components were exquisitely sensitive to the antitumor effects of GDC-0941. We found that several models that do not harbor these alterations also showed sensitivity, suggesting a need for additional diagnostic markers. Gene expression studies identified a collection of genes whose expression was associated with in vitro sensitivity to GDC-0941, and expression of a subset of these genes was found to be intimately linked to signaling through the pathway. CONCLUSION: Pathway focused biomarkers and the gene expression signature described in this study may have utility in the identification of patients likely to benefit from therapy with a selective PI3K inhibitor. CI - Copyright 2010 AACR. FAU - O'Brien, Carol AU - O'Brien C AD - Department of Development Oncology Diagnostics, Genentech, Inc., South San Francisco, California 94080, USA. FAU - Wallin, Jeffrey J AU - Wallin JJ FAU - Sampath, Deepak AU - Sampath D FAU - GuhaThakurta, Debraj AU - GuhaThakurta D FAU - Savage, Heidi AU - Savage H FAU - Punnoose, Elizabeth A AU - Punnoose EA FAU - Guan, Jane AU - Guan J FAU - Berry, Leanne AU - Berry L FAU - Prior, Wei Wei AU - Prior WW FAU - Amler, Lukas C AU - Amler LC FAU - Belvin, Marcia AU - Belvin M FAU - Friedman, Lori S AU - Friedman LS FAU - Lackner, Mark R AU - Lackner MR LA - eng PT - Journal Article DEP - 20100507 PL - United States TA - Clin Cancer Res JT - Clinical cancer research : an official journal of the American Association for Cancer Research JID - 9502500 RN - 0 (2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine) RN - 0 (Biomarkers, Tumor) RN - 0 (Indazoles) RN - 0 (Phosphoinositide-3 Kinase Inhibitors) RN - 0 (Sulfonamides) RN - EC 2.7.1.137 (Phosphatidylinositol 3-Kinase) RN - EC 2.7.10.1 (ERBB2 protein, human) RN - EC 2.7.10.1 (Receptor, ErbB-2) SB - IM EIN - Clin Cancer Res. 2011 Apr 1;17(7):2066-7 CIN - Clin Cancer Res. 2010 Jul 15;16(14):3523-5. PMID: 20538763 MH - Animals MH - Apoptosis/drug effects MH - Biomarkers, Tumor/antagonists & inhibitors/genetics/metabolism MH - Breast Neoplasms/*drug therapy/genetics/metabolism MH - Cell Cycle/drug effects MH - Cell Line, Tumor MH - Cell Survival/drug effects MH - *Disease Models, Animal MH - Female MH - Gene Expression Profiling MH - Humans MH - Indazoles/*pharmacology MH - Mammary Neoplasms, Experimental/*drug therapy/genetics/metabolism MH - Mice MH - Mutation MH - Neoplasm Transplantation MH - Oligonucleotide Array Sequence Analysis MH - Phosphatidylinositol 3-Kinase/genetics/metabolism MH - Phosphoinositide-3 Kinase Inhibitors MH - Predictive Value of Tests MH - Receptor, ErbB-2/antagonists & inhibitors/genetics MH - Sensitivity and Specificity MH - Sulfonamides/*pharmacology MH - Xenograft Model Antitumor Assays EDAT- 2010/05/11 06:00 MHDA- 2010/12/21 06:00 CRDT- 2010/05/11 06:00 PHST- 2010/05/11 06:00 [entrez] PHST- 2010/05/11 06:00 [pubmed] PHST- 2010/12/21 06:00 [medline] AID - 1078-0432.CCR-09-2828 [pii] AID - 10.1158/1078-0432.CCR-09-2828 [doi] PST - ppublish SO - Clin Cancer Res. 2010 Jul 15;16(14):3670-83. doi: 10.1158/1078-0432.CCR-09-2828. Epub 2010 May 7.