PMID- 23412337 OWN - NLM STAT- MEDLINE DCOM- 20130502 LR - 20220410 IS - 1091-6490 (Electronic) IS - 0027-8424 (Print) IS - 0027-8424 (Linking) VI - 110 IP - 10 DP - 2013 Mar 5 TI - Intratumor heterogeneity in human glioblastoma reflects cancer evolutionary dynamics. PG - 4009-14 LID - 10.1073/pnas.1219747110 [doi] AB - Glioblastoma (GB) is the most common and aggressive primary brain malignancy, with poor prognosis and a lack of effective therapeutic options. Accumulating evidence suggests that intratumor heterogeneity likely is the key to understanding treatment failure. However, the extent of intratumor heterogeneity as a result of tumor evolution is still poorly understood. To address this, we developed a unique surgical multisampling scheme to collect spatially distinct tumor fragments from 11 GB patients. We present an integrated genomic analysis that uncovers extensive intratumor heterogeneity, with most patients displaying different GB subtypes within the same tumor. Moreover, we reconstructed the phylogeny of the fragments for each patient, identifying copy number alterations in EGFR and CDKN2A/B/p14ARF as early events, and aberrations in PDGFRA and PTEN as later events during cancer progression. We also characterized the clonal organization of each tumor fragment at the single-molecule level, detecting multiple coexisting cell lineages. Our results reveal the genome-wide architecture of intratumor variability in GB across multiple spatial scales and patient-specific patterns of cancer evolution, with consequences for treatment design. FAU - Sottoriva, Andrea AU - Sottoriva A AD - Department of Oncology, University of Cambridge, Cambridge CB2 2XZ, United Kingdom. FAU - Spiteri, Inmaculada AU - Spiteri I FAU - Piccirillo, Sara G M AU - Piccirillo SG FAU - Touloumis, Anestis AU - Touloumis A FAU - Collins, V Peter AU - Collins VP FAU - Marioni, John C AU - Marioni JC FAU - Curtis, Christina AU - Curtis C FAU - Watts, Colin AU - Watts C FAU - Tavare, Simon AU - Tavare S LA - eng GR - C14303/A10825/Cancer Research UK/United Kingdom PT - Journal Article PT - Research Support, Non-U.S. Gov't DEP - 20130214 PL - United States TA - Proc Natl Acad Sci U S A JT - Proceedings of the National Academy of Sciences of the United States of America JID - 7505876 RN - 0 (DNA, Neoplasm) SB - IM MH - Base Sequence MH - Brain Neoplasms/*genetics MH - Chromosome Aberrations MH - DNA Copy Number Variations MH - DNA, Neoplasm/genetics MH - Disease Progression MH - Evolution, Molecular MH - Genes, erbB-1 MH - Genes, p16 MH - Glioblastoma/*genetics MH - Humans MH - Phylogeny MH - Transcriptome PMC - PMC3593922 COIS- The authors declare no conflict of interest. EDAT- 2013/02/16 06:00 MHDA- 2013/05/03 06:00 PMCR- 2013/02/14 CRDT- 2013/02/16 06:00 PHST- 2013/02/16 06:00 [entrez] PHST- 2013/02/16 06:00 [pubmed] PHST- 2013/05/03 06:00 [medline] PHST- 2013/02/14 00:00 [pmc-release] AID - 1219747110 [pii] AID - 201219747 [pii] AID - 10.1073/pnas.1219747110 [doi] PST - ppublish SO - Proc Natl Acad Sci U S A. 2013 Mar 5;110(10):4009-14. doi: 10.1073/pnas.1219747110. Epub 2013 Feb 14.